Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SEPT7P2-202ENST00000398921 823 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 PRELID1P1-201ENST00000403549 660 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL139805.1-201ENST00000407837 289 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC007738.1-201ENST00000413892 348 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC130360.1-201ENST00000425489 1117 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 DEFA9P-201ENST00000433042 285 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AP003385.3-201ENST00000472498 287 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 RN7SL790P-201ENST00000474043 298 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 ATP5LP5-201ENST00000483050 299 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 OR9N1P-201ENST00000491296 333 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC117500.1-201ENST00000497352 755 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 RFPL4AP3-201ENST00000515267 345 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC036111.2-201ENST00000533247 901 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 MIR212-201ENST00000586026 110 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL139099.4-201ENST00000614802 114 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 uc_338.7-201ENST00000621834 124 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 SOCS5P3-201ENST00000425115 1576 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 CR382285.2-201ENST00000624662 1495 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 RBPJP5-201ENST00000449433 1447 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 RNA5SP110-201ENST00000362638 115 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AL356968.2-201ENST00000412769 1257 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 SNRPFP2-201ENST00000440710 251 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AL445466.1-201ENST00000448432 357 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 RPS23P2-201ENST00000463671 415 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC073648.3-201ENST00000504939 925 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AL049829.3-202ENST00000604278 711 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 GAPDHP41-201ENST00000613707 975 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms