Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC096996.1-201ENST00000563813 325 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC092121.1-201ENST00000569452 202 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC093388.1-201ENST00000609166 430 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC022919.1-201ENST00000624979 626 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC129915.3-201ENST00000634128 948 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 OR8G3P-202ENST00000641572 1255 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC015799.1-201ENST00000622996 3122 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 WDR95P-201ENST00000425638 1542 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 RN7SKP15-201ENST00000364742 309 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 MIR130A-201ENST00000385274 89 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 NIFKP3-201ENST00000417799 865 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 BX323845.3-201ENST00000428215 527 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AC242426.1-201ENST00000435270 960 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AL512637.1-201ENST00000439523 1231 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 DNAJC19P5-201ENST00000443295 316 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AC107015.1-201ENST00000466902 747 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 NANOGNBP2-201ENST00000544753 553 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 HNRNPCP1-201ENST00000556181 766 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AP001357.1-201ENST00000586304 1053 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AC138473.1-201ENST00000605717 526 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 AC021422.1-201ENST00000621212 473 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.79□□□□□ -1.48
HLA-DPA1P20036 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DPA1P20036 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 GAPDHP48-201ENST00000436626 961 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 RPS7P6-201ENST00000485777 579 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC090058.1-201ENST00000498788 435 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 UGT2A3P7-201ENST00000510485 734 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 SCARNA6.1-201ENST00000516989 238 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 IGLV3-30-201ENST00000524362 298 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AP003080.1-202ENST00000526526 915 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms