Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 GMFB-210ENST00000628554 639 ntTSL 4 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 LINC02495-203ENST00000636704 242 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC244258.1-201ENST00000637553 1071 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC096992.2-201ENST00000609553 1684 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC079949.2-201ENST00000617117 2933 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL390237.1-201ENST00000404226 1415 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC093225.1-201ENST00000506867 1408 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 Y_RNA.77-201ENST00000362962 107 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RPL5P20-201ENST00000403848 896 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL139805.1-201ENST00000407837 289 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL359092.1-201ENST00000417156 265 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 MTND4P3-201ENST00000417829 541 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RPS3AP37-201ENST00000419176 745 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL391987.1-201ENST00000441025 200 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL645936.1-201ENST00000441979 518 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 CEACAMP5-201ENST00000448037 961 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RPL7P45-201ENST00000455851 743 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 RN7SKP35-201ENST00000517210 151 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC087897.1-201ENST00000550134 156 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 CYCSP38-201ENST00000559840 322 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC135628.1-201ENST00000568867 534 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC007346.1-201ENST00000569208 867 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AL121834.1-201ENST00000572284 509 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC012254.4-201ENST00000588843 273 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AP001981.2-201ENST00000603241 418 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC002069.2-201ENST00000603580 883 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 MIR6085-201ENST00000618314 110 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC067852.7-201ENST00000623270 535 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC003985.2-201ENST00000562268 1669 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 AC020658.2-201ENST00000559030 4020 ntBASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CSB-PGBD3P0DP91 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC093909.5-201ENST00000621839 1799 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 SNORD116-12-201ENST00000384468 92 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL663109.1-201ENST00000411498 844 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RAP1BP1-201ENST00000412709 553 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC105402.1-201ENST00000413336 545 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RPS3P2-201ENST00000421346 701 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL513175.2-201ENST00000422071 443 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC084754.1-201ENST00000463466 464 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL157777.1-201ENST00000468100 304 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms