Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
TPM1P09493 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 RNU6-84P-201ENST00000607737 102 ntBASIC6.11□□□□□ -1.43
TPM1P09493 MIR6809-201ENST00000612189 116 ntBASIC6.11□□□□□ -1.43
TPM1P09493 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.11□□□□□ -1.43
TPM1P09493 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 AC104260.2-201ENST00000623551 3497 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AC006206.1-201ENST00000544842 3387 ntBASIC6.11□□□□□ -1.43
TPM1P09493 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 AC073136.1-201ENST00000449426 2884 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM1P09493 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM1P09493 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
TPM1P09493 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM1P09493 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 RN7SKP74-201ENST00000362849 309 ntBASIC6.1□□□□□ -1.43
TPM1P09493 SNORA51.9-201ENST00000384295 124 ntBASIC6.1□□□□□ -1.43
TPM1P09493 NPM1P40-201ENST00000412758 733 ntBASIC6.1□□□□□ -1.43
TPM1P09493 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 CBX1P3-201ENST00000413296 527 ntBASIC6.1□□□□□ -1.43
TPM1P09493 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC013410.1-201ENST00000436223 1232 ntBASIC6.1□□□□□ -1.43
TPM1P09493 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC009963.3-201ENST00000458090 486 ntBASIC6.1□□□□□ -1.43
TPM1P09493 SNRPCP11-201ENST00000492453 205 ntBASIC6.1□□□□□ -1.43
TPM1P09493 AC138409.2-202ENST00000507274 458 ntBASIC6.1□□□□□ -1.43
TPM1P09493 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC027026.1-201ENST00000532323 742 ntBASIC6.1□□□□□ -1.43
TPM1P09493 PCNAP4-201ENST00000532690 730 ntBASIC6.1□□□□□ -1.43
TPM1P09493 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AC006530.1-201ENST00000555980 571 ntBASIC6.1□□□□□ -1.43
TPM1P09493 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.1□□□□□ -1.43
TPM1P09493 MIR4472-2-201ENST00000582069 67 ntBASIC6.1□□□□□ -1.43
TPM1P09493 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 AP005262.1-201ENST00000582646 997 ntBASIC6.1□□□□□ -1.43
TPM1P09493 BNIP3P41-202ENST00000616656 861 ntBASIC6.1□□□□□ -1.43
TPM1P09493 AC007204.1-201ENST00000621794 555 ntBASIC6.1□□□□□ -1.43
TPM1P09493 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
TPM1P09493 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TPM1P09493 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM1P09493 AC133552.1-201ENST00000569988 4007 ntBASIC6.1□□□□□ -1.43
TPM1P09493 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM1P09493 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM1P09493 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 MT-RNR2-201ENST00000387347 1559 ntBASIC6.1□□□□□ -1.43
TPM1P09493 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
TPM1P09493 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM1P09493 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM1P09493 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TPM1P09493 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM1P09493 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TPM1P09493 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 RBBP4P5-201ENST00000398583 1266 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AL009179.1-201ENST00000406085 265 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AL445213.1-201ENST00000412589 747 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AK4P4-201ENST00000419465 646 ntBASIC6.09□□□□□ -1.43
TPM1P09493 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 GAPDHP48-201ENST00000436626 961 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM1P09493 AL596266.1-201ENST00000448132 400 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AL358876.1-201ENST00000453364 1075 ntBASIC6.09□□□□□ -1.43
TPM1P09493 RPL32P33-201ENST00000487023 394 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AC073610.1-201ENST00000489971 396 ntBASIC6.09□□□□□ -1.43
TPM1P09493 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 RN7SKP238-201ENST00000516483 249 ntBASIC6.09□□□□□ -1.43
TPM1P09493 SCARNA6.1-201ENST00000516989 238 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM1P09493 AC021678.3-201ENST00000517893 476 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM1P09493 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms