Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOC1P02654 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
APOC1P02654 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 RPS14P4-201ENST00000415880 418 ntBASIC5.02□□□□□ -1.61
APOC1P02654 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.02□□□□□ -1.61
APOC1P02654 FAM183DP-201ENST00000421987 399 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC126120.1-201ENST00000431082 470 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 RN7SL197P-201ENST00000466981 299 ntBASIC5.02□□□□□ -1.61
APOC1P02654 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 RN7SKP238-201ENST00000516483 249 ntBASIC5.02□□□□□ -1.61
APOC1P02654 RN7SKP35-201ENST00000517210 151 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.02□□□□□ -1.61
APOC1P02654 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.02□□□□□ -1.61
APOC1P02654 AP000859.1-201ENST00000525536 307 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 AC084121.1-201ENST00000533882 835 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOC1P02654 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.02□□□□□ -1.61
APOC1P02654 AL356801.1-201ENST00000559320 294 ntBASIC5.02□□□□□ -1.61
APOC1P02654 MIR744-201ENST00000578242 98 ntBASIC5.02□□□□□ -1.61
APOC1P02654 FAM27E4-201ENST00000605259 342 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC108673.3-201ENST00000609183 335 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AL359091.2-201ENST00000609303 556 ntBASIC5.02□□□□□ -1.61
APOC1P02654 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOC1P02654 AL035661.1-201ENST00000620459 1144 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AL591926.1-201ENST00000620542 217 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC022400.9-201ENST00000623633 273 ntBASIC5.02□□□□□ -1.61
APOC1P02654 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
APOC1P02654 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOC1P02654 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.02□□□□□ -1.61
APOC1P02654 AC112198.2-201ENST00000426589 6996 ntBASIC5.02□□□□□ -1.61
APOC1P02654 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
APOC1P02654 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
APOC1P02654 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOC1P02654 PSG10P-201ENST00000501199 1500 ntBASIC5.02□□□□□ -1.61
APOC1P02654 AC090181.3-201ENST00000624777 1514 ntBASIC5.02□□□□□ -1.61
APOC1P02654 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
APOC1P02654 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.01□□□□□ -1.61
APOC1P02654 AC083843.3-201ENST00000623679 2186 ntBASIC5.01□□□□□ -1.61
APOC1P02654 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 RBPJP2-201ENST00000618187 1444 ntBASIC5.01□□□□□ -1.61
APOC1P02654 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 NXT1P1-201ENST00000458481 316 ntBASIC5.01□□□□□ -1.61
APOC1P02654 TPT1P1-201ENST00000458495 518 ntBASIC5.01□□□□□ -1.61
APOC1P02654 RN7SL346P-201ENST00000491561 294 ntBASIC5.01□□□□□ -1.61
APOC1P02654 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.01□□□□□ -1.61
APOC1P02654 AC021146.10-201ENST00000515628 706 ntBASIC5.01□□□□□ -1.61
APOC1P02654 IGKV3D-25-201ENST00000519599 235 ntBASIC5.01□□□□□ -1.61
APOC1P02654 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.01□□□□□ -1.61
APOC1P02654 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.01□□□□□ -1.61
APOC1P02654 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.01□□□□□ -1.61
APOC1P02654 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.01□□□□□ -1.61
APOC1P02654 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.01□□□□□ -1.61
APOC1P02654 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.01□□□□□ -1.61
APOC1P02654 MIR5010-201ENST00000582846 120 ntBASIC5.01□□□□□ -1.61
APOC1P02654 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.01□□□□□ -1.61
APOC1P02654 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.01□□□□□ -1.61
APOC1P02654 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.01□□□□□ -1.61
APOC1P02654 AC091167.5-201ENST00000605689 894 ntBASIC5.01□□□□□ -1.61
APOC1P02654 AL451049.1-201ENST00000608672 497 ntBASIC5.01□□□□□ -1.61
APOC1P02654 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.01□□□□□ -1.61
APOC1P02654 MIR6806-201ENST00000622141 64 ntBASIC5.01□□□□□ -1.61
APOC1P02654 OR11H2-202ENST00000641517 1085 ntBASIC5.01□□□□□ -1.61
APOC1P02654 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.01□□□□□ -1.61
APOC1P02654 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
APOC1P02654 OR4F13P-202ENST00000560066 2054 ntBASIC5.01□□□□□ -1.61
APOC1P02654 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOC1P02654 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.01□□□□□ -1.61
APOC1P02654 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5□□□□□ -1.61
APOC1P02654 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOC1P02654 MFSD8-219ENST00000641228 2559 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms