Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC003973.3-201ENST00000624863 2822 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NKX2-2O95096 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 RNU6-609P-201ENST00000365459 107 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NKX2-2O95096 PTGES3P2-201ENST00000407942 482 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC234781.4-201ENST00000419384 244 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 MTND4LP13-201ENST00000425022 298 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 CRIP1P1-201ENST00000427567 185 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 BX119321.1-201ENST00000428912 797 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 MTCYBP29-201ENST00000436327 1006 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 ELOCP3-201ENST00000439303 348 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 MTND2P6-201ENST00000455337 1030 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC004129.2-201ENST00000457229 287 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 RNU1-88P-201ENST00000459274 128 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 RN7SL168P-201ENST00000463821 279 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC015908.1-201ENST00000478739 476 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC099521.1-201ENST00000482557 334 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 RN7SL170P-201ENST00000487098 295 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 RN7SL649P-201ENST00000496974 275 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 MTND3P3-201ENST00000505004 126 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 RNU6-1102P-201ENST00000516149 96 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC006518.1-201ENST00000541449 943 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL356801.1-201ENST00000559320 294 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL356608.1-201ENST00000610034 820 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NKX2-2O95096 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 OR11H2-202ENST00000641517 1085 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NKX2-2O95096 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NKX2-2O95096 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-2O95096 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX2-2O95096 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 SPATA2P1-201ENST00000431223 2055 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
NKX2-2O95096 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 RNA5SP273-201ENST00000362484 113 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX2-2O95096 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AC004386.1-201ENST00000393214 761 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AL034403.1-201ENST00000399414 885 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC099535.1-201ENST00000408928 371 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 RN7SKP279-201ENST00000411383 298 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 MARK2P12-201ENST00000420129 585 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AL121882.1-201ENST00000422893 417 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC021876.1-201ENST00000425959 359 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 DEFA9P-201ENST00000433042 285 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 snoU13.29-201ENST00000459370 104 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC078857.1-201ENST00000469870 667 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AP002884.1-201ENST00000479691 655 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 PDCL3P4-201ENST00000489621 720 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 RN7SL57P-201ENST00000493687 290 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms