Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PDZRN3Q9UPQ7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9.06□□□□□ -0.96
PDZRN3Q9UPQ7 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.06□□□□□ -0.96
PDZRN3Q9UPQ7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 ENO1P4-201ENST00000416471 1785 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MT-RNR2-201ENST00000387347 1559 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RPL24P4-201ENST00000326586 421 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RNU6-207P-201ENST00000384137 107 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RNU6-40P-201ENST00000384254 107 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RNU4-61P-201ENST00000411243 107 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RN7SKP85-201ENST00000411349 318 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 RPL18AP14-201ENST00000417685 526 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC008753.1-201ENST00000423096 284 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 FTLP17-201ENST00000432567 525 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC104698.1-201ENST00000435671 276 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 GAPDHP53-201ENST00000458397 924 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC096576.1-201ENST00000489014 359 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MTCYBP18-201ENST00000501056 747 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC009567.2-201ENST00000502989 349 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC112225.1-201ENST00000508230 297 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AP003033.2-201ENST00000528901 805 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC069240.2-201ENST00000550242 609 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC024267.2-201ENST00000582737 417 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC006270.3-201ENST00000605967 1036 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AL137000.1-201ENST00000610528 1244 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MIR7109-201ENST00000613748 65 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MIR6849-201ENST00000618543 69 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 OR5H6-203ENST00000642105 978 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 IFIT1P1-201ENST00000400497 1449 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 AC015871.3-201ENST00000618835 2261 ntBASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PDZRN3Q9UPQ7 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC007998.4-201ENST00000612496 2533 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 USP9YP3-201ENST00000434481 1766 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 RNU4-73P-201ENST00000363164 141 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.548-201ENST00000384656 105 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 MT-TL1-201ENST00000386347 75 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 CXADRP1-201ENST00000398098 1095 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 MYO5BP3-201ENST00000431872 1279 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 MTND1P28-201ENST00000435623 950 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AL138899.2-201ENST00000439139 499 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 IPO7P1-201ENST00000442031 636 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 SETP6-201ENST00000479329 568 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms