Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 RNFT1P3-201ENST00000340898 1052 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AL121886.1-201ENST00000358609 435 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC019205.1-201ENST00000421830 730 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC073476.1-201ENST00000452854 407 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 SNORD125-201ENST00000459538 96 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC138409.2-202ENST00000507274 458 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 RN7SKP238-201ENST00000516483 249 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC009879.1-201ENST00000520029 839 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 BTG1P1-201ENST00000540396 508 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC096996.1-201ENST00000563813 325 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 OR1E3-201ENST00000575608 948 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 MIR4776-2-201ENST00000580204 80 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AL136131.3-201ENST00000607600 188 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 HTR1DP1-201ENST00000616500 888 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 QRSL1P1-201ENST00000400977 1540 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AC133552.1-201ENST00000569988 4007 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 AL513548.1-201ENST00000562904 1724 ntBASIC5.05□□□□□ -1.6
COPS3Q9UNS2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPS3Q9UNS2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 NIFKP3-201ENST00000417799 865 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 THEM7P-201ENST00000419556 672 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL139158.1-201ENST00000424719 340 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 NFYAP1-201ENST00000431953 972 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 RPL5P7-201ENST00000444235 813 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 LINC02210-201ENST00000444561 288 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 RPS23P2-201ENST00000463671 415 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC098847.1-201ENST00000473094 348 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 SETP1-201ENST00000556014 845 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 ARGFXP2-201ENST00000579304 949 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AC108673.3-201ENST00000609183 335 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 HSPD1P9-201ENST00000420325 1636 ntBASIC5.04□□□□□ -1.6
COPS3Q9UNS2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
COPS3Q9UNS2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 RNA5SP500-201ENST00000364486 119 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 U3.28-201ENST00000391249 210 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 RBBP4P5-201ENST00000398583 1266 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 CBX1P3-201ENST00000413296 527 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.03□□□□□ -1.6
COPS3Q9UNS2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 PNKDP1-201ENST00000435914 430 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 CLNS1AP1-201ENST00000435954 682 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 EIF5AP4-201ENST00000441206 465 ntBASIC5.03□□□□□ -1.6
COPS3Q9UNS2 MTND6P5-201ENST00000448266 512 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms