Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC007342.9-201ENST00000623877 1385 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC020656.2-201ENST00000613291 5309 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 MIR551A-201ENST00000385042 96 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 OR6E1P-201ENST00000414424 923 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 LDHBP2-201ENST00000456969 1005 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC021193.1-201ENST00000511607 420 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 NRBF2P4-201ENST00000520874 850 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC092709.1-201ENST00000521355 1045 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC135626.1-201ENST00000556983 435 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 AC010547.6-201ENST00000571789 193 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 RNF19BPY-201ENST00000458209 1550 ntBASIC5.88□□□□□ -1.47
SIX2Q9NPC8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX2Q9NPC8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AL353796.1-201ENST00000561542 3241 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC240504.1-201ENST00000395709 845 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC079809.1-201ENST00000415468 276 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 RPL34P3-201ENST00000421454 338 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 MTND6P12-201ENST00000428247 522 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 MRPS21P3-201ENST00000436696 262 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC002504.1-201ENST00000438281 691 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC094085.1-201ENST00000468914 584 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC007998.1-201ENST00000474156 672 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC109464.1-201ENST00000511091 819 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 HMGN1P9-201ENST00000515212 298 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC244107.2-201ENST00000611773 76 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 AC008115.3-201ENST00000614874 549 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 uc_338.7-201ENST00000621834 124 ntBASIC5.87□□□□□ -1.47
SIX2Q9NPC8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX2Q9NPC8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.86□□□□□ -1.47
SIX2Q9NPC8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.86□□□□□ -1.47
SIX2Q9NPC8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SIX2Q9NPC8 ABCC13-202ENST00000463099 3842 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms