Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 VN1R12P-201ENST00000403778 876 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 RPS3AP2-201ENST00000407190 754 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC099535.1-201ENST00000408928 371 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC245060.4-201ENST00000413293 1121 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC234781.4-201ENST00000419384 244 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 HMGB3P24-201ENST00000433260 622 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC017007.3-201ENST00000479865 435 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 RN7SKP253-201ENST00000516424 309 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 IGLV3-24-201ENST00000517477 197 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 OR4A17P-201ENST00000526032 904 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC087565.3-203ENST00000641018 837 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC007938.2-201ENST00000604666 2634 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 GAPDHP24-201ENST00000328713 983 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 OR56A4-201ENST00000330728 1209 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MIR375-201ENST00000362103 64 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 SNORA64.1-201ENST00000362600 132 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC127526.2-201ENST00000426436 775 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MTND2P40-201ENST00000436718 841 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL596266.1-201ENST00000448132 400 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AP006222.1-205ENST00000450734 457 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC083899.1-201ENST00000454465 3819 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 PSAT1P4-201ENST00000466500 526 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 RNA5SP271-201ENST00000516700 88 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 HMGB1P42-201ENST00000532126 553 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 H3F3BP2-201ENST00000583907 357 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC015802.2-201ENST00000589690 189 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL138895.2-201ENST00000603019 178 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MIR6071-201ENST00000616741 78 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AL390318.1-201ENST00000624564 687 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC40Q9H9A6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AP001284.1-201ENST00000528393 2118 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms