Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SNORA64.1-201ENST00000362600 132 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 RN7SKP160-201ENST00000363804 340 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AL136116.2-201ENST00000404020 785 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 MIR1178-201ENST00000408396 91 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 PTCD2P2-201ENST00000415579 1095 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 Z93019.1-201ENST00000416450 973 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 RPS4XP5-201ENST00000419038 768 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 MRPS21P2-201ENST00000424704 264 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AL365220.1-201ENST00000432923 399 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 HMGB3P24-201ENST00000433260 622 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC073909.1-201ENST00000447112 999 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 MTND3P4-201ENST00000453537 303 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 RPS23P6-201ENST00000466136 431 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AL035690.1-201ENST00000490892 383 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 SNORA43.3-201ENST00000517240 103 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 MIR4443-201ENST00000585052 53 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC008507.2-201ENST00000588402 1176 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC069234.4-201ENST00000621276 412 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC004777.1-201ENST00000624317 287 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC106858.1-201ENST00000637497 429 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 OR11H2-202ENST00000641517 1085 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 NCOA4P2-201ENST00000340589 1813 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 AP001157.1-201ENST00000550837 2339 ntBASIC6.08□□□□□ -1.44
EBF3Q9H4W6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
EBF3Q9H4W6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 SAMM50P1-201ENST00000455403 1399 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AL121977.1-201ENST00000401636 979 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC099677.3-201ENST00000427081 395 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 BRWD1P3-201ENST00000428816 390 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 RPL5P2-201ENST00000429598 854 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 SCAND3P1-201ENST00000439854 1060 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 LRRC37A14P-201ENST00000452297 462 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 SDC4P-201ENST00000453285 601 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC099521.1-201ENST00000482557 334 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 RPL37AP8-201ENST00000494116 276 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 CCDC11P1-201ENST00000503137 1162 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC008945.1-201ENST00000505144 499 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC138866.2-201ENST00000508650 584 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC110760.3-202ENST00000515177 371 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 TXNP4-201ENST00000575018 310 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC025857.2-201ENST00000602711 238 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AL391597.1-201ENST00000618707 694 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC009269.6-201ENST00000621778 588 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 HPVC1-201ENST00000629899 1198 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC138907.8-201ENST00000623981 2256 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 AC016583.1-201ENST00000624221 2431 ntBASIC6.07□□□□□ -1.44
EBF3Q9H4W6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
EBF3Q9H4W6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms