Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 ATP5F1P2-201ENST00000398143 760 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 CYCSP17-201ENST00000407870 315 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 USP9YP11-201ENST00000427537 717 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 AC016908.1-201ENST00000442571 1219 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC092601.1-201ENST00000444526 383 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 AL445991.1-201ENST00000450381 475 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 RPL7AP71-201ENST00000451120 739 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK1Q99986 AC004815.1-201ENST00000484185 331 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 NACAP5-201ENST00000509863 636 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC011352.2-201ENST00000514574 1016 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 HMGB1P1-201ENST00000522557 636 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK1Q99986 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 OR4A21P-201ENST00000532759 944 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK1Q99986 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK1Q99986 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 RN7SL199P-201ENST00000578752 281 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 RN7SL656P-201ENST00000579044 281 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 RN7SL404P-201ENST00000582421 281 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC015802.2-201ENST00000589690 189 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 AP002884.5-201ENST00000595053 1132 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 RPL7AP69-201ENST00000595306 806 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 AC013468.1-201ENST00000608680 598 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC091768.1-201ENST00000609258 930 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 MIR6889-201ENST00000613185 59 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AC011472.4-201ENST00000615848 491 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 OR1S1-201ENST00000624470 978 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 AP000550.3-201ENST00000637734 379 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VRK1Q99986 BX649567.1-201ENST00000642071 1134 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 AC027575.3-201ENST00000583058 2747 ntBASIC5.83□□□□□ -1.48
VRK1Q99986 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
VRK1Q99986 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
VRK1Q99986 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC010132.4-201ENST00000569883 1368 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 AC007012.2-201ENST00000623206 1676 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK1Q99986 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK1Q99986 CDC27P2-201ENST00000425026 1922 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK1Q99986 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VRK1Q99986 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK1Q99986 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VRK1Q99986 SNORA70H-201ENST00000383910 135 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 SNORA70J-201ENST00000384182 135 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 RNU6-244P-201ENST00000391028 104 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VRK1Q99986 RNA5SP498-201ENST00000411342 120 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 CDC42P6-201ENST00000421246 576 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK1Q99986 MTCO1P52-201ENST00000433928 531 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK1Q99986 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK1Q99986 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK1Q99986 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK1Q99986 H3F3BP1-201ENST00000440551 403 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 MTND2P22-201ENST00000444325 1033 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 SETD6P1-201ENST00000444575 317 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC011037.1-201ENST00000483964 558 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC015524.1-201ENST00000491585 472 ntBASIC5.82□□□□□ -1.48
VRK1Q99986 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.82□□□□□ -1.48
VRK1Q99986 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.82□□□□□ -1.48
VRK1Q99986 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK1Q99986 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK1Q99986 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms