Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 OR5H2-201ENST00000355273 945 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 RNA5SP433-201ENST00000364491 114 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 RNA5SP156-201ENST00000410250 110 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LIPT1P1-201ENST00000415870 1186 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC017078.1-201ENST00000416146 368 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC073648.4-201ENST00000442655 781 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC004263.1-201ENST00000479327 332 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AP002884.1-201ENST00000479691 655 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 SNORA19.3-201ENST00000516165 130 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 RNU4-18P-201ENST00000516751 149 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AP003355.1-201ENST00000518956 587 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC090819.1-201ENST00000523800 1111 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AGGF1P8-201ENST00000562979 1000 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC023825.1-201ENST00000566704 1030 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC010735.1-201ENST00000567305 1026 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AL109653.1-201ENST00000603091 248 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 Z99497.2-201ENST00000603634 310 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 OR7A19P-201ENST00000608051 733 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC068880.4-201ENST00000623082 495 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC062029.1-202ENST00000606164 3651 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 AC007159.1-201ENST00000566529 4706 ntBASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC005618.1-201ENST00000606901 3148 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 OR11H13P-201ENST00000359695 979 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 SNORA21-201ENST00000362423 132 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 SNORA81-201ENST00000408493 178 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL353706.1-201ENST00000436728 494 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC245047.2-201ENST00000441060 530 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092967.1-201ENST00000449016 481 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC002553.3-201ENST00000453002 341 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 USP9YP25-201ENST00000457708 443 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC068228.1-201ENST00000461723 211 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 OR7E99P-201ENST00000505750 922 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 MTCYBP16-201ENST00000509187 1129 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 HNRNPRP2-201ENST00000528421 743 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC090888.1-201ENST00000561335 1141 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC007346.1-201ENST00000569208 867 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC068790.6-201ENST00000602558 258 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms