Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 ZNF619P1-201ENST00000446539 752 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 HMGB1P7-201ENST00000450921 612 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 PPIAP7-201ENST00000454070 489 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 RN7SL254P-201ENST00000460609 284 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC008945.1-201ENST00000505144 499 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC021193.1-201ENST00000511607 420 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 CR383658.1-201ENST00000514609 734 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 HSD3BP3-201ENST00000514706 994 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 RN7SKP35-201ENST00000517210 151 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC103833.1-201ENST00000517442 172 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AP000620.1-201ENST00000527147 504 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AGGF1P9-201ENST00000561884 913 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC109446.2-201ENST00000567872 497 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 AP005136.1-201ENST00000579765 429 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 MIR4502-201ENST00000580432 81 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC073333.2-201ENST00000603589 769 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 MIR6806-201ENST00000622141 64 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6□□□□□ -1.45
VRK3Q8IV63 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 HSPD1P8-201ENST00000400121 1658 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC010401.2-201ENST00000575137 4934 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 OR5H2-201ENST00000355273 945 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 RN7SKP237-201ENST00000364663 301 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 SNORD116-4-201ENST00000384733 96 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 RNU6-298P-201ENST00000390888 96 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 GAPDHP15-201ENST00000398586 975 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL138880.1-201ENST00000405824 642 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 RN7SKP151-201ENST00000410230 316 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 RNA5SP156-201ENST00000410250 110 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL096829.1-201ENST00000413677 457 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 HMGA1P8-201ENST00000414130 321 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 MTND2P18-201ENST00000419962 1030 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC090960.1-201ENST00000421072 306 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 PTP4A1P7-201ENST00000423476 514 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 Z84478.1-201ENST00000438230 1219 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 GSTA7P-201ENST00000438425 448 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC002553.3-201ENST00000453002 341 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC010486.2-201ENST00000505572 483 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC121161.1-201ENST00000510606 652 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 MRPS36P3-201ENST00000519284 130 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC007346.1-201ENST00000569208 867 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms