Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 STMN1P2-201ENST00000508435 439 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 TCP11X3P-202ENST00000514289 1254 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RNU6-678P-201ENST00000516832 109 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AP003084.1-201ENST00000524828 742 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 OR5AK3P-201ENST00000527486 1297 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 OR4A40P-201ENST00000533878 948 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RN7SL131P-201ENST00000579043 256 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RN7SL42P-201ENST00000579786 294 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC022432.1-201ENST00000595739 310 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 KC877982.1-201ENST00000602313 470 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AL589743.7-201ENST00000612637 233 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC004836.1-201ENST00000623032 634 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC093909.6-201ENST00000624757 775 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ZNF849P-201ENST00000594711 1566 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC131971.1-201ENST00000332881 1482 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RPL12P13-201ENST00000310055 497 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 SNORA63-201ENST00000363450 132 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RNA5SP172-201ENST00000365061 118 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RNY3P10-201ENST00000384764 102 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 MIR152-201ENST00000385212 87 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RPL23AP59-201ENST00000399415 461 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL139135.1-201ENST00000412675 209 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL157698.1-201ENST00000415190 1011 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 NPM1P36-201ENST00000415681 835 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 PAICSP7-201ENST00000419829 962 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL513174.1-201ENST00000423182 629 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 USP9YP9-201ENST00000429406 715 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL606490.7-201ENST00000433136 191 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 PAXBP1P1-201ENST00000449315 447 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 SCDP1-201ENST00000455244 1081 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RPS4XP19-201ENST00000460237 736 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 NDUFA5P12-201ENST00000503796 343 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC113347.3-201ENST00000509113 148 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms