Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC009480.2-201ENST00000422916 432 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 EIF2S2P2-201ENST00000447161 982 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 RN7SKP122-201ENST00000515923 296 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 SCARNA9-201ENST00000530422 353 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 RPL32P23-201ENST00000397237 405 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 RNU2-50P-201ENST00000410494 143 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC091167.1-201ENST00000492017 396 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 MEMO1P5-201ENST00000604810 406 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC024941.1-201ENST00000612250 334 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 NLRP3P1-201ENST00000622303 1785 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 RNA5SP388-201ENST00000362584 119 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 VN1R21P-201ENST00000426703 765 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AL451136.1-201ENST00000435399 325 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AL445687.2-201ENST00000458156 728 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 SCARNA16.4-201ENST00000516956 187 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC105129.1-201ENST00000560250 297 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 OR4F13P-202ENST00000560066 2054 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 AC023141.6-201ENST00000429418 337 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 MIR4284-201ENST00000578924 81 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
VPS13CQ709C8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS13CQ709C8 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS13CQ709C8 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AL137100.1-201ENST00000556703 1620 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 GAPDHP56-201ENST00000506031 988 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 HMGB1P23-201ENST00000518743 568 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 MIR4444-1-201ENST00000581696 74 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 MIR4444-2-201ENST00000584390 74 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC019193.2-201ENST00000610012 634 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms