Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RPL7P16-201ENST00000479738 738 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 OR4A43P-201ENST00000532938 908 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 MIR3934-201ENST00000579806 107 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC234771.5-201ENST00000600161 514 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC104785.1-201ENST00000603220 588 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC073575.2-201ENST00000614212 627 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 IRF5P1-201ENST00000504852 2164 ntBASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 AL022394.1-201ENST00000606979 292 ntBASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 AC114774.1-201ENST00000507410 1770 ntBASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42BPAQ5VT25 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 CASC19-221ENST00000641309 1382 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 RN7SL738P-201ENST00000470264 297 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 RN7SL346P-201ENST00000491561 294 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AL671862.1-201ENST00000515851 349 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 NPM1P42-201ENST00000560329 862 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 AC007996.1-201ENST00000620414 2821 ntBASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CDC42BPAQ5VT25 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 THAP12P4-201ENST00000528321 2266 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AL359715.3-201ENST00000569267 2123 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 RNA5SP505-201ENST00000364748 108 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MGAT2P2-201ENST00000427194 797 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC008072.1-201ENST00000434254 824 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC009597.2-201ENST00000604659 592 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AL356752.1-201ENST00000615844 593 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC232271.1-201ENST00000602455 2715 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 U3.28-201ENST00000391249 210 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AL772161.1-201ENST00000439130 476 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 LINC02210-201ENST00000444561 288 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 KNOP1P3-201ENST00000446933 426 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms