Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL354696.1-201ENST00000614652 497 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 SRRM1P3-201ENST00000426911 2678 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL121768.1-201ENST00000613917 2544 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC007842.1-201ENST00000597336 2039 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 LINC02019-201ENST00000608605 2060 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 MRE11P1-201ENST00000464884 2127 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL159987.1-201ENST00000347911 293 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL121835.1-201ENST00000404250 354 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 RN7SKP278-201ENST00000410504 342 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL355433.1-201ENST00000422804 300 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 RSL24D1P8-201ENST00000434442 492 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 RNU7-157P-201ENST00000459600 66 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL133445.1-201ENST00000467051 452 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC087672.1-201ENST00000479876 766 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 DEFB109A-201ENST00000482450 265 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 RPS3AP15-201ENST00000483874 781 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 RN7SL570P-201ENST00000484405 292 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 RPL38P3-201ENST00000484463 213 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC008945.1-201ENST00000505144 499 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AP002981.1-201ENST00000517692 975 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC023389.2-201ENST00000580031 955 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC063977.5-201ENST00000601044 974 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AP001267.4-201ENST00000602598 545 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 SDR42E1P1-201ENST00000611327 477 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC104820.1-201ENST00000624183 307 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC130304.1-201ENST00000622942 2385 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC114786.1-201ENST00000512892 1415 ntBASIC6.16□□□□□ -1.42
USP41Q3LFD5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP41Q3LFD5 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.16□□□□□ -1.42
USP41Q3LFD5 AC093671.1-201ENST00000624981 2929 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP41Q3LFD5 GTF2IP4-201ENST00000453092 2054 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP41Q3LFD5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP41Q3LFD5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 TRBV8-1-201ENST00000481590 279 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 RN7SL184P-201ENST00000488308 297 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 OR2A3P-201ENST00000493774 953 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 AC074255.1-201ENST00000511259 501 ntBASIC6.15□□□□□ -1.42
USP41Q3LFD5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.15□□□□□ -1.42
USP41Q3LFD5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms