Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX4Q33E94 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC040958.1-201ENST00000561102 201 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC138207.8-204ENST00000579588 527 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 MIR6809-201ENST00000612189 116 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 MIR6721-201ENST00000617181 87 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
RFX4Q33E94 SAMMSON-227ENST00000642114 1199 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RFX4Q33E94 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AL078621.3-201ENST00000623707 2042 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.19□□□□□ -1.58
RFX4Q33E94 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AP005432.1-201ENST00000580891 3485 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 RNA5SP279-201ENST00000365513 117 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 SNORA51.9-201ENST00000384295 124 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RFX4Q33E94 RN7SKP86-201ENST00000410454 332 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 RPL7P56-201ENST00000429441 717 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC021106.1-201ENST00000509020 1058 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC009879.1-201ENST00000520029 839 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 MTCYBP13-201ENST00000578634 1093 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 H3F3BP2-201ENST00000583907 357 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC004801.6-201ENST00000616571 978 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.19□□□□□ -1.58
RFX4Q33E94 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RFX4Q33E94 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RFX4Q33E94 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RFX4Q33E94 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX4Q33E94 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AL354854.1-201ENST00000455940 1363 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 TRIM51GP-201ENST00000534741 1350 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 SNORD56.6-201ENST00000384569 71 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 PCNPP4-201ENST00000414817 517 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 RPL6P30-201ENST00000443382 862 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 RBMY2AP-201ENST00000445405 1157 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 RBMY2CP-201ENST00000448575 1157 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 RBMY2DP-202ENST00000448881 1157 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 RBMY2BP-202ENST00000451071 1156 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AZGP1P2-201ENST00000454506 345 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC021660.1-201ENST00000465006 554 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC098847.1-201ENST00000473094 348 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 UBFD1P1-201ENST00000473259 814 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms