Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RIMKLBP2-201ENST00000424737 654 ntBASIC4.97□□□□□ -1.61
VBP1P61758 GAPDHP48-201ENST00000436626 961 ntBASIC4.97□□□□□ -1.61
VBP1P61758 HMGB3P9-201ENST00000441799 583 ntBASIC4.97□□□□□ -1.61
VBP1P61758 BMS1P10-201ENST00000443754 1120 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.97□□□□□ -1.61
VBP1P61758 RPS18P1-201ENST00000447840 458 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.97□□□□□ -1.61
VBP1P61758 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.97□□□□□ -1.61
VBP1P61758 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.97□□□□□ -1.61
VBP1P61758 SNX18P25-201ENST00000510539 758 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.97□□□□□ -1.61
VBP1P61758 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 HMGN1P9-201ENST00000515212 298 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 CDC42P3-201ENST00000518493 633 ntBASIC4.97□□□□□ -1.61
VBP1P61758 TRIM51DP-201ENST00000529746 596 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.97□□□□□ -1.61
VBP1P61758 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.97□□□□□ -1.61
VBP1P61758 AL139099.4-201ENST00000614802 114 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AC131238.1-201ENST00000617135 328 ntBASIC4.97□□□□□ -1.61
VBP1P61758 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.97□□□□□ -1.61
VBP1P61758 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VBP1P61758 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
VBP1P61758 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.97□□□□□ -1.61
VBP1P61758 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VBP1P61758 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.96□□□□□ -1.61
VBP1P61758 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.61
VBP1P61758 Z83820.1-201ENST00000456978 1499 ntBASIC4.96□□□□□ -1.62
VBP1P61758 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.96□□□□□ -1.62
VBP1P61758 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VBP1P61758 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
VBP1P61758 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VBP1P61758 RNA5SP429-201ENST00000363688 109 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VBP1P61758 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VBP1P61758 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 SNORD56.6-201ENST00000384569 71 ntBASIC4.96□□□□□ -1.62
VBP1P61758 SNORA48.4-201ENST00000391089 134 ntBASIC4.96□□□□□ -1.62
VBP1P61758 RNA5SP155-201ENST00000411154 129 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 MARK2P12-201ENST00000420129 585 ntBASIC4.96□□□□□ -1.62
VBP1P61758 GPN3P1-201ENST00000423883 535 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC130360.1-201ENST00000425489 1117 ntBASIC4.96□□□□□ -1.62
VBP1P61758 DEFA9P-201ENST00000433042 285 ntBASIC4.96□□□□□ -1.62
VBP1P61758 CR391992.1-201ENST00000438601 394 ntBASIC4.96□□□□□ -1.62
VBP1P61758 SNRPFP2-201ENST00000440710 251 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 EIF5AP4-201ENST00000441206 465 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AL645936.1-201ENST00000441979 518 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC016772.1-201ENST00000444170 1261 ntBASIC4.96□□□□□ -1.62
VBP1P61758 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.96□□□□□ -1.62
VBP1P61758 AL139135.2-201ENST00000445040 433 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC073909.1-201ENST00000447112 999 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC002553.3-201ENST00000453002 341 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AL645937.3-201ENST00000453647 936 ntBASIC4.96□□□□□ -1.62
VBP1P61758 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 AC023245.1-201ENST00000468501 517 ntBASIC4.96□□□□□ -1.62
VBP1P61758 IMPA1P1-201ENST00000510718 842 ntBASIC4.96□□□□□ -1.62
VBP1P61758 CR383658.1-201ENST00000514609 734 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.96□□□□□ -1.62
VBP1P61758 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 AC130365.2-201ENST00000525882 1201 ntBASIC4.96□□□□□ -1.62
VBP1P61758 PMS2P3-207ENST00000529061 717 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.96□□□□□ -1.62
VBP1P61758 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VBP1P61758 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 SMIM12P1-201ENST00000603004 274 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.96□□□□□ -1.62
VBP1P61758 AL133406.3-201ENST00000606817 541 ntBASIC4.96□□□□□ -1.62
VBP1P61758 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.96□□□□□ -1.62
VBP1P61758 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VBP1P61758 AC004023.1-201ENST00000561473 1744 ntBASIC4.96□□□□□ -1.62
VBP1P61758 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VBP1P61758 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VBP1P61758 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VBP1P61758 MTCO1P28-201ENST00000574177 1528 ntBASIC4.96□□□□□ -1.62
VBP1P61758 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms