Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 OR4C49P-201ENST00000563891 900 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC092718.4-201ENST00000566639 716 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 AL354943.1-201ENST00000572103 781 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 AC016877.3-201ENST00000606778 504 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AL445423.1-201ENST00000609941 536 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC116165.3-201ENST00000614524 400 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 MIR6883-201ENST00000614952 78 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 MIR6085-201ENST00000618314 110 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.78□□□□□ -1.48
CLRN1P58418 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 YES1P1-201ENST00000418510 1628 ntBASIC5.77□□□□□ -1.48
CLRN1P58418 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC112243.1-201ENST00000623949 3851 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.77□□□□□ -1.49
CLRN1P58418 MTCO1P18-201ENST00000455518 1419 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC021755.1-201ENST00000559747 1447 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC008957.3-201ENST00000624112 2242 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 STAG3L4-201ENST00000352103 530 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RNA5SP308-201ENST00000362532 115 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RNU1-5P-201ENST00000362684 144 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC026310.1-201ENST00000396004 378 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 CHMP1B2P-201ENST00000399581 597 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 LYPLA1P3-201ENST00000402650 695 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RAP1BP1-201ENST00000412709 553 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.77□□□□□ -1.49
CLRN1P58418 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 USP9YP26-201ENST00000421008 661 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 CYCSP52-201ENST00000422857 310 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 C1DP1-201ENST00000426049 402 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 MTCO3P5-201ENST00000433620 714 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.77□□□□□ -1.49
CLRN1P58418 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC092106.2-201ENST00000436597 487 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.77□□□□□ -1.49
CLRN1P58418 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.77□□□□□ -1.49
CLRN1P58418 NPM1P9-201ENST00000453156 844 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 OR2AF1P-201ENST00000454899 889 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 MTND2P28-201ENST00000457540 1044 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RAP1BP2-201ENST00000478270 544 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC138938.1-201ENST00000515431 782 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.77□□□□□ -1.49
CLRN1P58418 RNU6-1129P-201ENST00000515964 104 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RNU5A-4P-201ENST00000516588 111 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC084337.1-201ENST00000524809 686 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 KCTD9P4-201ENST00000526766 1166 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 GTF2IP11-201ENST00000526931 420 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AP003033.1-201ENST00000527244 415 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 MIR4301-201ENST00000577203 66 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC019257.2-201ENST00000605539 497 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC012557.1-201ENST00000607115 611 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 AL392048.1-201ENST00000613946 534 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 LINC02211-204ENST00000642024 1070 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.77□□□□□ -1.49
CLRN1P58418 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.77□□□□□ -1.49
CLRN1P58418 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms