Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC009963.4-201ENST00000448535 339 ntBASIC6.22□□□□□ -1.41
VCPP55072 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 RN7SKP288-201ENST00000516227 268 ntBASIC6.22□□□□□ -1.41
VCPP55072 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.22□□□□□ -1.41
VCPP55072 OR56A7P-201ENST00000524865 941 ntBASIC6.22□□□□□ -1.41
VCPP55072 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.22□□□□□ -1.41
VCPP55072 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 AL356801.1-201ENST00000559320 294 ntBASIC6.22□□□□□ -1.41
VCPP55072 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 FKBP1AP1-201ENST00000594588 318 ntBASIC6.22□□□□□ -1.41
VCPP55072 AL139041.1-201ENST00000605480 610 ntBASIC6.22□□□□□ -1.41
VCPP55072 AC093388.1-201ENST00000609166 430 ntBASIC6.22□□□□□ -1.41
VCPP55072 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VCPP55072 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VCPP55072 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
VCPP55072 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
VCPP55072 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
VCPP55072 AL355834.1-201ENST00000556602 3965 ntBASIC6.21□□□□□ -1.41
VCPP55072 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VCPP55072 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 RNA5SP507-201ENST00000363603 121 ntBASIC6.21□□□□□ -1.42
VCPP55072 RNA5SP394-201ENST00000364216 119 ntBASIC6.21□□□□□ -1.42
VCPP55072 RNU11-201ENST00000387069 134 ntBASIC6.21□□□□□ -1.42
VCPP55072 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 RPL35AP3-201ENST00000414680 288 ntBASIC6.21□□□□□ -1.42
VCPP55072 BMS1P17-202ENST00000416720 316 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.21□□□□□ -1.42
VCPP55072 NMD3P2-201ENST00000421815 761 ntBASIC6.21□□□□□ -1.42
VCPP55072 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.21□□□□□ -1.42
VCPP55072 HMGB1P32-201ENST00000425971 565 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC009784.1-201ENST00000426484 460 ntBASIC6.21□□□□□ -1.42
VCPP55072 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 SDC4P-201ENST00000453285 601 ntBASIC6.21□□□□□ -1.42
VCPP55072 GEMIN2P1-201ENST00000454246 752 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC135999.1-201ENST00000478962 479 ntBASIC6.21□□□□□ -1.42
VCPP55072 HIGD1AP14-201ENST00000507617 282 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 RNU6-1334P-201ENST00000516032 105 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.21□□□□□ -1.42
VCPP55072 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.21□□□□□ -1.42
VCPP55072 HAUS8P1-201ENST00000549005 542 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 AC016839.1-201ENST00000578162 867 ntBASIC6.21□□□□□ -1.42
VCPP55072 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 AL360012.1-201ENST00000602813 131 ntBASIC6.21□□□□□ -1.42
VCPP55072 FAM27E4-201ENST00000605259 342 ntBASIC6.21□□□□□ -1.42
VCPP55072 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 AC105105.5-201ENST00000622635 1294 ntBASIC6.21□□□□□ -1.42
VCPP55072 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
VCPP55072 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.21□□□□□ -1.42
VCPP55072 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 GNL2P1-201ENST00000451274 2190 ntBASIC6.21□□□□□ -1.42
VCPP55072 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
VCPP55072 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VCPP55072 LINC02019-201ENST00000608605 2060 ntBASIC6.21□□□□□ -1.42
VCPP55072 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCPP55072 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VCPP55072 ICE2P1-201ENST00000512800 1849 ntBASIC6.2□□□□□ -1.42
VCPP55072 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VCPP55072 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VCPP55072 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
VCPP55072 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.2□□□□□ -1.42
VCPP55072 RNA5SP500-201ENST00000364486 119 ntBASIC6.2□□□□□ -1.42
VCPP55072 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VCPP55072 MIR550A3-201ENST00000390735 95 ntBASIC6.2□□□□□ -1.42
VCPP55072 RPL23AP27-201ENST00000415161 451 ntBASIC6.2□□□□□ -1.42
VCPP55072 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.2□□□□□ -1.42
VCPP55072 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.2□□□□□ -1.42
VCPP55072 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms