Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GLUD1P3-202ENST00000508551 200 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC020937.1-201ENST00000519677 1013 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC007342.5-201ENST00000571340 2142 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC005726.4-201ENST00000582858 458 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 RN7SL544P-201ENST00000617232 284 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 RN7SL763P-201ENST00000620922 284 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 AP005435.3-201ENST00000531260 3198 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 AC106872.5-201ENST00000508856 1416 ntBASIC5.04□□□□□ -1.6
CSNK1A1P48729 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSNK1A1P48729 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.04□□□□□ -1.6
CSNK1A1P48729 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC016745.2-201ENST00000608834 3443 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 RNU6-673P-201ENST00000365084 104 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 PEX12P1-201ENST00000400284 1048 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 RMRPP5-201ENST00000411156 267 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC127526.2-201ENST00000426436 775 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 VTI1BP4-201ENST00000427516 527 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 FTLP19-201ENST00000433300 394 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 GAPDHP62-201ENST00000515313 990 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 OR8Q1P-201ENST00000526467 655 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 HMGB1P42-201ENST00000532126 553 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC137627.1-201ENST00000545761 289 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 DHFRP1-201ENST00000579682 559 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AP001496.3-201ENST00000580230 913 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC010487.1-201ENST00000594408 1172 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 Z95327.3-201ENST00000610385 572 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AC022400.9-201ENST00000623633 273 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSNK1A1P48729 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CSNK1A1P48729 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.03□□□□□ -1.6
CSNK1A1P48729 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSNK1A1P48729 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSNK1A1P48729 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSNK1A1P48729 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSNK1A1P48729 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSNK1A1P48729 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL121886.1-201ENST00000358609 435 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 SNORA64.1-201ENST00000362600 132 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 RNA5SP30-201ENST00000365552 115 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AC096921.1-201ENST00000411661 375 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AC010740.1-201ENST00000417035 684 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 RPS3P2-201ENST00000421346 701 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 PRUNEP1-201ENST00000425846 705 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.02□□□□□ -1.61
CSNK1A1P48729 AL445665.1-202ENST00000452436 324 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 NXT1P1-201ENST00000458481 316 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 AC087672.1-201ENST00000479876 766 ntBASIC5.02□□□□□ -1.61
CSNK1A1P48729 ATP5LP5-201ENST00000483050 299 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms