Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 COX6B1P4-201ENST00000519826 484 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.94□□□□□ -1.62
CDX1P47902 OR8K2P-201ENST00000524645 927 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC027026.1-201ENST00000532323 742 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.94□□□□□ -1.62
CDX1P47902 AC084121.1-201ENST00000533882 835 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC068993.1-201ENST00000546724 589 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AL845552.1-201ENST00000556820 323 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.94□□□□□ -1.62
CDX1P47902 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.94□□□□□ -1.62
CDX1P47902 OR1E3-201ENST00000575608 948 ntBASIC4.94□□□□□ -1.62
CDX1P47902 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.94□□□□□ -1.62
CDX1P47902 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.94□□□□□ -1.62
CDX1P47902 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.94□□□□□ -1.62
CDX1P47902 AC135803.1-201ENST00000608748 565 ntBASIC4.94□□□□□ -1.62
CDX1P47902 CR589904.2-201ENST00000612533 440 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.94□□□□□ -1.62
CDX1P47902 AC074140.1-201ENST00000621617 208 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC020923.1-201ENST00000624021 917 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.94□□□□□ -1.62
CDX1P47902 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.94□□□□□ -1.62
CDX1P47902 AC099654.6-201ENST00000636487 512 ntBASIC4.94□□□□□ -1.62
CDX1P47902 AC079776.5-201ENST00000641920 211 ntBASIC4.94□□□□□ -1.62
CDX1P47902 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDX1P47902 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CDX1P47902 AC110792.3-201ENST00000595906 1614 ntBASIC4.94□□□□□ -1.62
CDX1P47902 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.93□□□□□ -1.62
CDX1P47902 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 AOX3P-204ENST00000491025 2107 ntBASIC4.93□□□□□ -1.62
CDX1P47902 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDX1P47902 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 AC015977.1-201ENST00000418887 292 ntBASIC4.93□□□□□ -1.62
CDX1P47902 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC092865.3-201ENST00000425390 1026 ntBASIC4.93□□□□□ -1.62
CDX1P47902 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 AC094019.1-201ENST00000434678 472 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 SOCS5P1-201ENST00000440415 949 ntBASIC4.93□□□□□ -1.62
CDX1P47902 RPL5P7-201ENST00000444235 813 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.93□□□□□ -1.62
CDX1P47902 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.93□□□□□ -1.62
CDX1P47902 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 AC021205.1-201ENST00000468797 348 ntBASIC4.93□□□□□ -1.62
CDX1P47902 RN7SL326P-201ENST00000477493 296 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AP002453.1-201ENST00000492327 668 ntBASIC4.93□□□□□ -1.62
CDX1P47902 EIF3LP3-201ENST00000495197 822 ntBASIC4.93□□□□□ -1.62
CDX1P47902 HAUS1P1-201ENST00000505275 832 ntBASIC4.93□□□□□ -1.62
CDX1P47902 SNX18P25-201ENST00000510539 758 ntBASIC4.93□□□□□ -1.62
CDX1P47902 ZNF519P4-201ENST00000514008 125 ntBASIC4.93□□□□□ -1.62
CDX1P47902 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 HSD3BP3-201ENST00000514706 994 ntBASIC4.93□□□□□ -1.62
CDX1P47902 TMEM97P2-201ENST00000517841 403 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 AC011853.1-201ENST00000518911 454 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC022826.1-201ENST00000519383 805 ntBASIC4.93□□□□□ -1.62
CDX1P47902 MTND2P7-201ENST00000521337 640 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC018442.3-201ENST00000523025 183 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 EIF4A2P5-201ENST00000529914 499 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.93□□□□□ -1.62
CDX1P47902 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.93□□□□□ -1.62
CDX1P47902 CKS1BP1-201ENST00000555221 240 ntBASIC4.93□□□□□ -1.62
CDX1P47902 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.93□□□□□ -1.62
CDX1P47902 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AL096803.3-201ENST00000609032 532 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AL356274.1-201ENST00000617064 410 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC073592.7-201ENST00000623659 507 ntBASIC4.93□□□□□ -1.62
CDX1P47902 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 AC103703.1-201ENST00000634783 663 ntBASIC4.93□□□□□ -1.62
CDX1P47902 OR7E91P-202ENST00000642062 1198 ntBASIC4.93□□□□□ -1.62
CDX1P47902 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms