Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSR1P43307 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 RN7SKP286-201ENST00000410894 299 ntBASIC6.11□□□□□ -1.43
SSR1P43307 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 AC093166.3-201ENST00000448785 303 ntBASIC6.11□□□□□ -1.43
SSR1P43307 AC004129.2-201ENST00000457229 287 ntBASIC6.11□□□□□ -1.43
SSR1P43307 AC023194.2-201ENST00000465398 406 ntBASIC6.11□□□□□ -1.43
SSR1P43307 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 OR4A43P-201ENST00000532938 908 ntBASIC6.11□□□□□ -1.43
SSR1P43307 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 MIR4776-2-201ENST00000580204 80 ntBASIC6.11□□□□□ -1.43
SSR1P43307 AC005244.1-201ENST00000582566 339 ntBASIC6.11□□□□□ -1.43
SSR1P43307 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 AC006115.2-201ENST00000596823 202 ntBASIC6.11□□□□□ -1.43
SSR1P43307 AL137072.1-201ENST00000603444 466 ntBASIC6.11□□□□□ -1.43
SSR1P43307 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.11□□□□□ -1.43
SSR1P43307 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
SSR1P43307 AL683826.1-201ENST00000624104 627 ntBASIC6.11□□□□□ -1.43
SSR1P43307 AC132825.8-201ENST00000640783 297 ntBASIC6.11□□□□□ -1.43
SSR1P43307 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.11□□□□□ -1.43
SSR1P43307 AC104964.3-201ENST00000606115 2860 ntBASIC6.11□□□□□ -1.43
SSR1P43307 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSR1P43307 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSR1P43307 QRSL1P1-201ENST00000400977 1540 ntBASIC6.1□□□□□ -1.43
SSR1P43307 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 AC104966.1-201ENST00000467010 1464 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.1□□□□□ -1.43
SSR1P43307 AC000123.3-201ENST00000624029 4975 ntBASIC6.1□□□□□ -1.43
SSR1P43307 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SSR1P43307 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.1□□□□□ -1.43
SSR1P43307 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSR1P43307 RN7SKP78-201ENST00000364711 318 ntBASIC6.1□□□□□ -1.43
SSR1P43307 RNA5SP487-201ENST00000410186 122 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.1□□□□□ -1.43
SSR1P43307 KIF4CP-201ENST00000422742 1279 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AL034379.1-201ENST00000423216 253 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AMYP1-201ENST00000440059 1023 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AC092106.1-201ENST00000444291 373 ntBASIC6.1□□□□□ -1.43
SSR1P43307 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.1□□□□□ -1.43
SSR1P43307 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.1□□□□□ -1.43
SSR1P43307 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.1□□□□□ -1.43
SSR1P43307 AC091874.2-201ENST00000505889 720 ntBASIC6.1□□□□□ -1.43
SSR1P43307 HSD3BP3-201ENST00000514706 994 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.1□□□□□ -1.43
SSR1P43307 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.1□□□□□ -1.43
SSR1P43307 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSR1P43307 AC084121.1-201ENST00000533882 835 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AL121594.2-201ENST00000541658 472 ntBASIC6.1□□□□□ -1.43
SSR1P43307 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.1□□□□□ -1.43
SSR1P43307 LSM3P2-201ENST00000551246 273 ntBASIC6.1□□□□□ -1.43
SSR1P43307 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 RPA2P1-201ENST00000556557 721 ntBASIC6.1□□□□□ -1.43
SSR1P43307 AL845552.1-201ENST00000556820 323 ntBASIC6.1□□□□□ -1.43
SSR1P43307 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.1□□□□□ -1.43
SSR1P43307 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
SSR1P43307 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.1□□□□□ -1.43
SSR1P43307 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SSR1P43307 MFSD8-239ENST00000641590 2479 ntBASIC6.1□□□□□ -1.43
SSR1P43307 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SSR1P43307 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.1□□□□□ -1.43
SSR1P43307 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSR1P43307 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms