Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HMGB1P44-201ENST00000508597 572 ntBASIC8.71□□□□□ -1.01
CLIP1P30622 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.71□□□□□ -1.01
CLIP1P30622 AP001357.1-201ENST00000586304 1053 ntBASIC8.71□□□□□ -1.01
CLIP1P30622 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.71□□□□□ -1.01
CLIP1P30622 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CLIP1P30622 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CLIP1P30622 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CLIP1P30622 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CLIP1P30622 AC093829.1-201ENST00000506662 1618 ntBASIC8.71□□□□□ -1.01
CLIP1P30622 AC034229.2-201ENST00000566945 2508 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CLIP1P30622 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.71□□□□□ -1.02
CLIP1P30622 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CLIP1P30622 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.71□□□□□ -1.02
CLIP1P30622 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CLIP1P30622 AL133325.1-201ENST00000421090 382 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.71□□□□□ -1.02
CLIP1P30622 CBX1P5-201ENST00000475330 559 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 AC147055.3-201ENST00000510547 851 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.71□□□□□ -1.02
CLIP1P30622 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.71□□□□□ -1.02
CLIP1P30622 OR11H3P-201ENST00000554547 982 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CLIP1P30622 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.71□□□□□ -1.02
CLIP1P30622 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.71□□□□□ -1.02
CLIP1P30622 RN7SL708P-201ENST00000580952 299 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.71□□□□□ -1.02
CLIP1P30622 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
CLIP1P30622 AC015712.7-201ENST00000615211 635 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 AC135068.5-201ENST00000624197 983 ntBASIC8.71□□□□□ -1.02
CLIP1P30622 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.71□□□□□ -1.02
CLIP1P30622 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.71□□□□□ -1.02
CLIP1P30622 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CLIP1P30622 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CLIP1P30622 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CLIP1P30622 AL359955.1-201ENST00000455242 3275 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.7□□□□□ -1.02
CLIP1P30622 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CLIP1P30622 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CLIP1P30622 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CLIP1P30622 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CLIP1P30622 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
CLIP1P30622 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.7□□□□□ -1.02
CLIP1P30622 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CLIP1P30622 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.7□□□□□ -1.02
CLIP1P30622 RPL23AP18-201ENST00000416139 468 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.7□□□□□ -1.02
CLIP1P30622 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 RPL7P56-201ENST00000429441 717 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 GSTM5P1-201ENST00000434751 660 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 LINC02210-201ENST00000444561 288 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CLIP1P30622 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.7□□□□□ -1.02
CLIP1P30622 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.7□□□□□ -1.02
CLIP1P30622 OR5D15P-201ENST00000531671 942 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.7□□□□□ -1.02
CLIP1P30622 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 Mico1.1-201ENST00000611698 204 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 AC090527.3-201ENST00000619041 548 ntBASIC8.7□□□□□ -1.02
CLIP1P30622 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC8.7□□□□□ -1.02
CLIP1P30622 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CLIP1P30622 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 ABCA11P-202ENST00000504019 2110 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 MAPK10-338ENST00000641647 3362 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CLIP1P30622 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.69□□□□□ -1.02
CLIP1P30622 SNORD56.6-201ENST00000384569 71 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 MIR585-201ENST00000384887 94 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.69□□□□□ -1.02
CLIP1P30622 RPL34P27-201ENST00000428810 349 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.69□□□□□ -1.02
CLIP1P30622 AC004453.1-201ENST00000487895 408 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.69□□□□□ -1.02
CLIP1P30622 HMGB1P40-201ENST00000525121 540 ntBASIC8.69□□□□□ -1.02
CLIP1P30622 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CLIP1P30622 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
CLIP1P30622 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.68□□□□□ -1.02
CLIP1P30622 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CLIP1P30622 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CLIP1P30622 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CLIP1P30622 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.68□□□□□ -1.02
CLIP1P30622 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CLIP1P30622 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CLIP1P30622 RNU1-106P-201ENST00000384382 164 ntBASIC8.68□□□□□ -1.02
CLIP1P30622 RNA5SP487-201ENST00000410186 122 ntBASIC8.68□□□□□ -1.02
CLIP1P30622 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.68□□□□□ -1.02
CLIP1P30622 AC073072.2-201ENST00000447425 348 ntBASIC8.68□□□□□ -1.02
CLIP1P30622 AC015864.1-201ENST00000496512 544 ntBASIC8.68□□□□□ -1.02
CLIP1P30622 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.68□□□□□ -1.02
CLIP1P30622 AP004607.2-201ENST00000533949 322 ntBASIC8.68□□□□□ -1.02
CLIP1P30622 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms