Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCNAP12004 AL512283.1-201ENST00000606756 1384 ntBASIC5.76□□□□□ -1.49
PCNAP12004 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCNAP12004 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
PCNAP12004 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCNAP12004 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCNAP12004 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCNAP12004 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCNAP12004 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.76□□□□□ -1.49
PCNAP12004 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 AC107977.1-201ENST00000355745 939 ntBASIC5.75□□□□□ -1.49
PCNAP12004 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 RPSAP65-201ENST00000429660 595 ntBASIC5.75□□□□□ -1.49
PCNAP12004 MTCO1P45-201ENST00000431457 267 ntBASIC5.75□□□□□ -1.49
PCNAP12004 RPL5P7-201ENST00000444235 813 ntBASIC5.75□□□□□ -1.49
PCNAP12004 TIMM8BP2-201ENST00000445940 251 ntBASIC5.75□□□□□ -1.49
PCNAP12004 VN1R48P-201ENST00000448149 1036 ntBASIC5.75□□□□□ -1.49
PCNAP12004 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 AC105918.1-201ENST00000474399 838 ntBASIC5.75□□□□□ -1.49
PCNAP12004 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.75□□□□□ -1.49
PCNAP12004 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
PCNAP12004 AC134349.2-201ENST00000535136 910 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.75□□□□□ -1.49
PCNAP12004 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.75□□□□□ -1.49
PCNAP12004 AL049779.3-201ENST00000557141 606 ntBASIC5.75□□□□□ -1.49
PCNAP12004 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PCNAP12004 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 AC144521.1-201ENST00000607148 956 ntBASIC5.75□□□□□ -1.49
PCNAP12004 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 AL021918.2-201ENST00000613415 194 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AC004801.6-201ENST00000616571 978 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 AC015660.5-201ENST00000623238 564 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AL357562.1-201ENST00000624911 609 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AC073488.3-201ENST00000631611 778 ntBASIC5.75□□□□□ -1.49
PCNAP12004 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.75□□□□□ -1.49
PCNAP12004 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.75□□□□□ -1.49
PCNAP12004 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCNAP12004 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 RNU6-40P-201ENST00000384254 107 ntBASIC5.74□□□□□ -1.49
PCNAP12004 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.74□□□□□ -1.49
PCNAP12004 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 AC245096.1-201ENST00000413104 546 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.74□□□□□ -1.49
PCNAP12004 AC013410.2-201ENST00000422627 201 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AC113412.1-201ENST00000425840 504 ntBASIC5.74□□□□□ -1.49
PCNAP12004 RNF19BPX-201ENST00000426224 625 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 AC074367.1-201ENST00000438685 1125 ntBASIC5.74□□□□□ -1.49
PCNAP12004 TRIM60P16-201ENST00000444048 694 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 AC022336.1-201ENST00000475510 337 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 PFN1P6-201ENST00000476786 399 ntBASIC5.74□□□□□ -1.49
PCNAP12004 TRBV5-2-201ENST00000489095 273 ntBASIC5.74□□□□□ -1.49
PCNAP12004 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.74□□□□□ -1.49
PCNAP12004 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.74□□□□□ -1.49
PCNAP12004 AC008629.2-201ENST00000503783 483 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AL158068.1-201ENST00000506116 616 ntBASIC5.74□□□□□ -1.49
PCNAP12004 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 AC018797.1-201ENST00000510791 255 ntBASIC5.74□□□□□ -1.49
PCNAP12004 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 AP003049.1-201ENST00000529418 457 ntBASIC5.74□□□□□ -1.49
PCNAP12004 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms