Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
THBS1P07996 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
THBS1P07996 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
THBS1P07996 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
THBS1P07996 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
THBS1P07996 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 MFSD8-227ENST00000641393 4069 ntBASIC7.12□□□□□ -1.27
THBS1P07996 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.12□□□□□ -1.27
THBS1P07996 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 ENSAP3-201ENST00000312710 333 ntBASIC7.12□□□□□ -1.27
THBS1P07996 Y_RNA.1-201ENST00000352915 104 ntBASIC7.12□□□□□ -1.27
THBS1P07996 Y_RNA.58-201ENST00000362807 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 Y_RNA.145-201ENST00000363527 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 Y_RNA.154-201ENST00000363624 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 RNY3P1-201ENST00000365085 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 RNY3-201ENST00000365484 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 Y_RNA.490-201ENST00000384413 102 ntBASIC7.12□□□□□ -1.27
THBS1P07996 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 RPSAP72-201ENST00000407020 358 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AL451061.1-201ENST00000407887 862 ntBASIC7.12□□□□□ -1.27
THBS1P07996 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.12□□□□□ -1.27
THBS1P07996 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.12□□□□□ -1.27
THBS1P07996 YWHAQP9-201ENST00000445891 512 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC239798.1-201ENST00000449024 1176 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.12□□□□□ -1.27
THBS1P07996 BX842559.2-201ENST00000451418 605 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AL590639.1-201ENST00000456484 337 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AL590326.1-201ENST00000460857 334 ntBASIC7.12□□□□□ -1.27
THBS1P07996 RPL34P33-201ENST00000486062 334 ntBASIC7.12□□□□□ -1.27
THBS1P07996 RPS15AP36-201ENST00000492022 382 ntBASIC7.12□□□□□ -1.27
THBS1P07996 EIF4E2P2-201ENST00000492033 736 ntBASIC7.12□□□□□ -1.27
THBS1P07996 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.12□□□□□ -1.27
THBS1P07996 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 RNU6-1281P-201ENST00000516223 105 ntBASIC7.12□□□□□ -1.27
THBS1P07996 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.12□□□□□ -1.27
THBS1P07996 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 AC008870.2-201ENST00000568262 1024 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC136944.5-201ENST00000573021 151 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 AC090699.1-201ENST00000586264 321 ntBASIC7.12□□□□□ -1.27
THBS1P07996 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AL133215.3-201ENST00000609801 448 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
THBS1P07996 STMN1P1-201ENST00000617809 440 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC245028.3-201ENST00000618197 285 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC006840.1-201ENST00000623069 542 ntBASIC7.12□□□□□ -1.27
THBS1P07996 AC068880.5-201ENST00000624331 290 ntBASIC7.12□□□□□ -1.27
THBS1P07996 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 MAPK10-313ENST00000641405 2469 ntBASIC7.12□□□□□ -1.27
THBS1P07996 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.12□□□□□ -1.27
THBS1P07996 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 AC092162.3-201ENST00000624511 1624 ntBASIC7.12□□□□□ -1.27
THBS1P07996 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
THBS1P07996 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
THBS1P07996 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.11□□□□□ -1.27
THBS1P07996 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.11□□□□□ -1.27
THBS1P07996 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.11□□□□□ -1.27
THBS1P07996 ENO1P4-201ENST00000416471 1785 ntBASIC7.11□□□□□ -1.27
THBS1P07996 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
THBS1P07996 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 AC245505.2-201ENST00000553572 3055 ntBASIC7.11□□□□□ -1.27
THBS1P07996 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.11□□□□□ -1.27
THBS1P07996 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
THBS1P07996 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.11□□□□□ -1.27
THBS1P07996 RNU6-1103P-201ENST00000384150 107 ntBASIC7.11□□□□□ -1.27
THBS1P07996 AC025750.1-201ENST00000399891 379 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms