Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CHRNA1P02708 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CHRNA1P02708 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHRNA1P02708 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHRNA1P02708 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHRNA1P02708 PWAR1-201ENST00000624188 2414 ntBASIC6.17□□□□□ -1.42
CHRNA1P02708 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
CHRNA1P02708 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHRNA1P02708 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.17□□□□□ -1.42
CHRNA1P02708 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.17□□□□□ -1.42
CHRNA1P02708 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHRNA1P02708 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 AC005725.1-201ENST00000577346 2607 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CHRNA1P02708 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHRNA1P02708 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHRNA1P02708 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHRNA1P02708 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 AL121835.1-201ENST00000404250 354 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 AC117434.1-201ENST00000419971 836 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 AL355032.1-201ENST00000472981 438 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AP006245.2-201ENST00000522004 300 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 OR4A46P-201ENST00000527255 933 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AL049779.2-201ENST00000553847 315 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.16□□□□□ -1.42
CHRNA1P02708 AGGF1P7-201ENST00000562369 913 ntBASIC6.16□□□□□ -1.42
CHRNA1P02708 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CHRNA1P02708 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CHRNA1P02708 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHRNA1P02708 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CHRNA1P02708 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA1P02708 OR52B5P-201ENST00000435337 951 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AC245047.2-201ENST00000441060 530 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 REG1CP-206ENST00000447469 496 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
CHRNA1P02708 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.15□□□□□ -1.42
CHRNA1P02708 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA1P02708 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA1P02708 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA1P02708 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA1P02708 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA1P02708 AP000619.2-201ENST00000546014 969 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.15□□□□□ -1.42
CHRNA1P02708 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.15□□□□□ -1.42
CHRNA1P02708 MIR4420-201ENST00000583944 77 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.15□□□□□ -1.42
CHRNA1P02708 LSM1P2-201ENST00000604911 322 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AL445222.1-201ENST00000607259 628 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AF117829.2-201ENST00000619538 361 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA1P02708 OR52B5P-202ENST00000641118 1110 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 SAMMSON-209ENST00000641222 1100 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 AL449283.1-201ENST00000602631 3403 ntBASIC6.15□□□□□ -1.42
CHRNA1P02708 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.15□□□□□ -1.42
CHRNA1P02708 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHRNA1P02708 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA1P02708 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.15□□□□□ -1.43
CHRNA1P02708 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.15□□□□□ -1.43
CHRNA1P02708 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA1P02708 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.15□□□□□ -1.43
CHRNA1P02708 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
CHRNA1P02708 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.15□□□□□ -1.43
CHRNA1P02708 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA1P02708 AC093297.3-201ENST00000607056 2517 ntBASIC6.15□□□□□ -1.43
CHRNA1P02708 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA1P02708 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA1P02708 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC007342.5-201ENST00000571340 2142 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA1P02708 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 RNA5SP335-201ENST00000363817 110 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 RN7SKP6-201ENST00000364795 319 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms