Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.73
HLA-DQA1P01909 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
HLA-DQA1P01909 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.73
HLA-DQA1P01909 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DQA1P01909 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DQA1P01909 AC027088.4-201ENST00000611559 1947 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 MIR191-201ENST00000384873 92 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AL078599.1-201ENST00000402075 293 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RPL10P10-201ENST00000403509 664 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC007738.1-201ENST00000413892 348 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RPL21P50-201ENST00000417698 477 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC013268.2-201ENST00000420753 337 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC104333.2-201ENST00000422630 192 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RIMKLBP2-201ENST00000424737 654 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 NANOGP4-201ENST00000427230 913 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 MTND6P12-201ENST00000428247 522 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC007679.3-201ENST00000434035 414 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC010086.1-201ENST00000437359 1052 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RPL12P49-201ENST00000441100 121 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC023141.8-201ENST00000442554 208 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RPS7P3-201ENST00000443360 580 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC090804.1-201ENST00000448870 490 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 GOLGA5P1-201ENST00000507317 980 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CDC42P3-201ENST00000518493 633 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 GARSP1-201ENST00000570895 719 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 DHFRP1-201ENST00000579682 559 ntBASIC4.21□□□□□ -1.74
HLA-DQA1P01909 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1P01909 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MFSD8-219ENST00000641228 2559 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC004817.4-201ENST00000602396 3625 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC100778.3-201ENST00000580060 1750 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 CASC19-248ENST00000641674 1356 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RNA5SP326-201ENST00000363209 110 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RNA5SP77-201ENST00000365394 120 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 SNORD56.6-201ENST00000384569 71 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 PSMA6P1-201ENST00000400275 741 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MIR1271-201ENST00000408537 86 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RN7SKP146-201ENST00000410242 334 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RPS4XP5-201ENST00000419038 768 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 OR6C64P-201ENST00000419708 825 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RPSAP32-201ENST00000432681 526 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms