Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC008115.4-201ENST00000619780 775 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC123769.1-201ENST00000530992 3192 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL590763.1-201ENST00000398297 1545 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 U3.7-201ENST00000363668 216 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL133388.1-201ENST00000404509 287 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 SLC35E1P1-201ENST00000419313 864 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 RIMKLBP2-201ENST00000424737 654 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL590399.2-201ENST00000427536 309 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 MYO5BP2-201ENST00000449815 1277 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 RPS21P4-201ENST00000487122 248 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 RN7SL30P-201ENST00000488416 306 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 MTND6P2-201ENST00000512226 524 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AL049779.2-201ENST00000553847 315 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 PCA3_2.1-201ENST00000612507 409 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 WBP1LP8-201ENST00000617401 327 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 AC073365.1-203ENST00000641055 1992 ntBASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 U3.10-201ENST00000364459 214 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 RNA5SP339-201ENST00000390987 122 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 DSTNP5-201ENST00000427921 523 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 RPL7P56-201ENST00000429441 717 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 RN7SL447P-201ENST00000494711 245 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 HMGB1P44-201ENST00000508597 572 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 RNA5SP92-201ENST00000516437 110 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 SCARNA16.4-201ENST00000516956 187 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC027308.1-201ENST00000517993 110 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC125612.1-201ENST00000547580 377 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC018558.5-201ENST00000565840 952 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC016180.1-201ENST00000567945 403 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC060766.1-201ENST00000590824 627 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 AC244517.3-201ENST00000616254 1235 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 MIR6719-201ENST00000622428 87 ntBASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.9□□□□□ -1.46
SMIM28A0A1B0GU29 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 OR52B5P-204ENST00000641744 3467 ntBASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SMIM28A0A1B0GU29 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms