Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 PNKDP1-201ENST00000435914 430 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 EMC3-AS1-205ENST00000438698 534 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 ARF4P4-201ENST00000439608 520 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AL022237.1-201ENST00000446663 358 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC084754.1-201ENST00000463466 464 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 RPL5P12-201ENST00000477071 851 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 MTND2P38-201ENST00000522536 667 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC008521.2-201ENST00000591021 259 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 BNIP3P32-201ENST00000600015 554 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 SUMO2P14-201ENST00000604488 293 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AP001437.1-201ENST00000608783 456 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC005261.2-201ENST00000593427 4258 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.27□□□□□ -1.4
PCDHB1Q9Y5F3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 OR11H13P-201ENST00000359695 979 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RNU5B-4P-201ENST00000363508 111 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RNU6-31P-201ENST00000384388 108 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 LYPLA1P3-201ENST00000402650 695 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC116036.1-201ENST00000412199 367 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL158825.1-201ENST00000414735 521 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 SSR1P2-201ENST00000415208 787 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RPS3P2-201ENST00000421346 701 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RPL7AP14-201ENST00000424041 802 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL035246.1-201ENST00000433554 1255 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RPS7P2-201ENST00000435134 607 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC010240.2-201ENST00000445363 1205 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL031313.1-201ENST00000448435 256 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC009963.3-201ENST00000458090 486 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC093719.1-201ENST00000480427 441 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SL214P-201ENST00000487317 265 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AP002453.1-201ENST00000492327 668 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC093534.1-201ENST00000504977 132 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 SNX18P24-201ENST00000505249 671 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC093720.1-201ENST00000505681 714 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RNA5SP400-201ENST00000517155 111 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP35-201ENST00000517210 151 ntBASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHB1Q9Y5F3 NANOGNBP2-201ENST00000544753 553 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms