Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 PNPT1P2-201ENST00000456768 2050 ntBASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC9.35□□□□□ -0.91
PCDHB13Q9Y5F0 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 SP110-215ENST00000540870 2032 ntTSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 OR11H5P-202ENST00000641612 1325 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-874P-201ENST00000362390 105 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU5E-1-201ENST00000362477 120 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-777P-201ENST00000364265 104 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-108P-201ENST00000365558 107 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-746P-201ENST00000384112 109 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 Y_RNA.515-201ENST00000384535 112 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 MIR514A2-201ENST00000385131 88 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 MIR514A3-201ENST00000385132 88 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL360271.1-201ENST00000395679 510 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC073264.1-201ENST00000411508 416 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC080125.1-201ENST00000414888 684 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC104837.2-201ENST00000427236 424 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 SNAI1P1-201ENST00000428587 777 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC092431.2-201ENST00000441658 318 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL359672.1-201ENST00000442302 409 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC104651.2-201ENST00000447549 528 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 OR52I1-201ENST00000450052 1050 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-1004P-201ENST00000516584 111 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 SLC25A3P2-201ENST00000547720 880 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL162632.2-201ENST00000553933 399 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AL683813.2-201ENST00000605245 502 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 MIR193BHG-214ENST00000641765 509 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 CDC27P3-201ENST00000635418 1910 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 CDY4P-201ENST00000418290 1513 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 TRIM51EP-201ENST00000524374 1516 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC102941.1-201ENST00000567616 1537 ntBASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PCDHB13Q9Y5F0 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RPL4P3-201ENST00000428881 1311 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 MIR425-201ENST00000362162 87 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RNU6-774P-201ENST00000363238 107 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RNU6-1097P-201ENST00000363586 107 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RNU6-996P-201ENST00000365438 107 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 Y_RNA.396-201ENST00000383949 103 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RNU6-1040P-201ENST00000383974 107 ntBASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.33□□□□□ -0.92
PCDHB13Q9Y5F0 RPL12P27-201ENST00000414870 496 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms