Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 CASC19-248ENST00000641674 1356 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 SNORA16A-201ENST00000384342 137 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC007394.1-201ENST00000421941 531 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC105399.1-202ENST00000447303 205 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 RPL7P6-201ENST00000480903 738 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 RN7SL184P-201ENST00000488308 297 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 RN7SL547P-201ENST00000490793 290 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC126177.5-201ENST00000549599 178 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC239803.2-201ENST00000610161 430 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 NDUFB4P8-201ENST00000435351 367 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 SPRYD7P1-201ENST00000443861 570 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 SUMO2P1-206ENST00000445436 284 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AC108693.1-201ENST00000496068 432 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 MTND6P2-201ENST00000512226 524 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 SUMO2P15-201ENST00000604285 278 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 AC004948.1-201ENST00000609858 672 ntBASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.44□□□□□ -1.22
NPC1L1Q9UHC9 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AC004076.2-201ENST00000620532 3323 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AC079097.1-201ENST00000512187 1399 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AC073465.2-201ENST00000440938 498 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 RPS26P41-201ENST00000450370 284 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 RN7SL356P-201ENST00000582228 248 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AP000769.2-201ENST00000602344 396 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 MIR6798-201ENST00000612887 67 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AL359513.1-201ENST00000614364 557 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 MIR6730-201ENST00000622213 67 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 AC018445.2-201ENST00000622987 260 ntBASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPC1L1Q9UHC9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 RNA5SP319-201ENST00000362768 119 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms