Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AL445383.1-201ENST00000554689 874 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC138207.8-204ENST00000579588 527 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MIR4312-201ENST00000579909 76 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC024267.2-201ENST00000582737 417 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC074141.1-201ENST00000588129 2995 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AL021997.1-201ENST00000605757 193 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC013468.1-201ENST00000608680 598 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC108673.3-201ENST00000609183 335 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MIR6885-201ENST00000612241 66 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC025262.3-201ENST00000623666 360 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 BX284613.1-201ENST00000452221 1641 ntBASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 AC062022.1-201ENST00000451026 1684 ntBASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 AC005332.9-201ENST00000620266 2921 ntBASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXP3Q9BZS1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 TMCC1P1-201ENST00000518897 1980 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AP002800.1-201ENST00000624982 2225 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RNA5SP350-201ENST00000363298 111 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RNU4-4P-201ENST00000364588 130 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RNU6-304P-201ENST00000364855 107 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RAB5CP1-201ENST00000395972 580 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 CYCSP17-201ENST00000407870 315 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RPL18AP14-201ENST00000417685 526 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC018804.1-201ENST00000430381 618 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC096632.2-201ENST00000438139 1239 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC009518.3-201ENST00000438972 253 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC064862.5-201ENST00000440618 334 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL360221.1-201ENST00000445989 335 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 OR52E7P-201ENST00000452394 933 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC080014.1-201ENST00000496877 1201 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RNA5SP278-201ENST00000517055 102 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AGGF1P8-201ENST00000562979 1000 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AP003465.2-201ENST00000602571 373 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL020997.3-201ENST00000602843 359 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AP000811.1-201ENST00000603803 651 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AL031601.1-201ENST00000605702 394 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AP002360.4-201ENST00000606980 481 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC103591.3-201ENST00000608684 209 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC005899.7-201ENST00000618199 588 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC004836.1-201ENST00000623032 634 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC019080.5-201ENST00000624891 757 ntBASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXP3Q9BZS1 AC007603.3-201ENST00000636915 979 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms