Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL669831.4-202ENST00000590817 238 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC233280.2-201ENST00000603917 1070 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 BNIP3P10-201ENST00000605360 577 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC006065.6-201ENST00000625201 545 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL161891.1-201ENST00000621575 4636 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC000367.1-201ENST00000452711 1766 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC017007.4-201ENST00000503353 1352 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PABPC1P9-201ENST00000426076 1612 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 OR10AB1P-202ENST00000641219 1686 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 SNORD56.2-201ENST00000363242 71 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 RNU6-196P-201ENST00000384315 107 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC104297.1-201ENST00000393779 870 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 RNA5SP198-201ENST00000410376 127 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL136454.1-201ENST00000443181 466 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL162395.1-201ENST00000457882 422 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 RN7SL254P-201ENST00000460609 284 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 MTND1P16-201ENST00000465177 898 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 RN7SKP196-201ENST00000516267 345 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AP005597.4-201ENST00000526762 229 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AP001893.2-201ENST00000526949 202 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC008055.1-201ENST00000547032 609 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL162311.2-201ENST00000550416 709 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC233699.1-201ENST00000569955 1168 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 MIR4489-201ENST00000578869 62 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 MIR3171-201ENST00000584270 74 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC000068.3-201ENST00000607934 427 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AC118658.2-201ENST00000618697 459 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 AL353795.1-201ENST00000439134 1775 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 NCAPD2P1-201ENST00000432906 1801 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 LSMEM1-201ENST00000312849 1870 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 NEPNP-201ENST00000404786 1371 ntBASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC7.45□□□□□ -1.22
COL25A1Q9BXS0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms