Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AP002370.1-201ENST00000528055 1602 ntBASIC5.85□□□□□ -1.47
VRK1Q99986 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.84□□□□□ -1.47
VRK1Q99986 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.84□□□□□ -1.47
VRK1Q99986 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 AL512310.3-201ENST00000547023 1335 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 RNU4-92P-201ENST00000363783 136 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 RN7SKP47-201ENST00000365347 328 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 RNU6-224P-201ENST00000384055 107 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 Y_RNA.578-201ENST00000390903 88 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.84□□□□□ -1.47
VRK1Q99986 RPS27AP11-201ENST00000402798 447 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 RN7SKP221-201ENST00000410420 301 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 GAPDHP57-201ENST00000424400 585 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VRK1Q99986 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.84□□□□□ -1.47
VRK1Q99986 E2F6P3-201ENST00000441743 743 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 SNRPBP1-201ENST00000443634 282 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 RPS18P1-201ENST00000447840 458 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 NMNAT1P3-201ENST00000457517 888 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AP003385.3-201ENST00000472498 287 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 H3F3AP3-201ENST00000497682 407 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC105313.1-201ENST00000509121 353 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC074087.1-201ENST00000512059 724 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.84□□□□□ -1.47
VRK1Q99986 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 AP006587.5-201ENST00000532033 739 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 MTCO2P15-201ENST00000532655 656 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC138207.8-204ENST00000579588 527 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 MIR4732-201ENST00000581873 76 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 MIR212-201ENST00000586026 110 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC020914.7-201ENST00000594477 545 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC013444.2-201ENST00000603317 787 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC091193.1-201ENST00000604640 448 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 AC004908.1-201ENST00000606572 541 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 AC005514.1-201ENST00000623521 208 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.84□□□□□ -1.47
VRK1Q99986 OR8A1-204ENST00000642111 1145 ntBASIC5.84□□□□□ -1.47
VRK1Q99986 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.84□□□□□ -1.47
VRK1Q99986 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.84□□□□□ -1.47
VRK1Q99986 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VRK1Q99986 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
VRK1Q99986 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
VRK1Q99986 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
VRK1Q99986 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
VRK1Q99986 AL512329.1-201ENST00000404600 1592 ntBASIC5.84□□□□□ -1.48
VRK1Q99986 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
VRK1Q99986 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.48
VRK1Q99986 MTCO1P15-201ENST00000529569 1526 ntBASIC5.84□□□□□ -1.48
VRK1Q99986 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK1Q99986 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK1Q99986 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK1Q99986 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VRK1Q99986 PPIAP26-201ENST00000377951 522 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms