Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AP005136.2-201ENST00000583253 1049 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC005229.3-201ENST00000603438 323 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 NDUFB9P1-201ENST00000604683 510 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC107308.1-201ENST00000615897 301 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC104820.1-201ENST00000624183 307 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC103703.1-201ENST00000634783 663 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC007603.3-201ENST00000636915 979 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC011933.2-201ENST00000578539 2790 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RFT1Q96AA3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFT1Q96AA3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFT1Q96AA3 RNU105B-201ENST00000364478 208 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 CXADRP1-201ENST00000398098 1095 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 AL358178.1-201ENST00000407698 397 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 RNU2-18P-201ENST00000411224 162 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 RPS18P1-201ENST00000447840 458 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 H3F3AP5-201ENST00000475267 429 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 RN7SL836P-201ENST00000476140 296 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 RPL12P30-201ENST00000488389 499 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 OR56A7P-201ENST00000524865 941 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 NPIPB14P-203ENST00000532298 987 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC011891.2-201ENST00000604949 397 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC022001.1-201ENST00000605193 268 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 CXADRP3-202ENST00000617265 1100 ntBASIC5.15□□□□□ -1.59
RFT1Q96AA3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFT1Q96AA3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.15□□□□□ -1.59
RFT1Q96AA3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC012254.3-201ENST00000591183 2117 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 PSMA6P1-201ENST00000400275 741 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 SNRPEP6-201ENST00000407465 277 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 GPS2P1-201ENST00000411761 986 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms