Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC016180.1-201ENST00000567945 403 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 MIR3189-201ENST00000578735 73 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC067852.5-201ENST00000589299 310 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC015802.2-201ENST00000589690 189 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AL589674.2-201ENST00000604304 337 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AP000864.1-201ENST00000609424 650 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AL133370.2-201ENST00000619934 439 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AC087269.2-201ENST00000641764 975 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 AL359091.1-201ENST00000449048 1734 ntBASIC6.04□□□□□ -1.44
HMGB4Q8WW32 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB4Q8WW32 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 MIR1178-201ENST00000408396 91 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC093155.2-201ENST00000420734 937 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 GLUD1P9-201ENST00000420997 1173 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 NMD3P2-201ENST00000421815 761 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AK3P5-201ENST00000432033 519 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC245517.2-201ENST00000442890 346 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 EIF2S2P5-201ENST00000457635 968 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 OR9N1P-202ENST00000494289 481 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 CAB39P1-201ENST00000502277 460 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC113192.3-201ENST00000529152 742 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC015911.5-201ENST00000587076 451 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC242628.1-201ENST00000606810 391 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC004775.1-201ENST00000607389 753 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 SDR42E1P1-201ENST00000611327 477 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC015722.2-201ENST00000622210 551 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC097460.3-201ENST00000623099 442 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC019080.5-201ENST00000624891 757 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC003985.2-201ENST00000562268 1669 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 HDAC1P2-201ENST00000453661 1398 ntBASIC6.03□□□□□ -1.44
HMGB4Q8WW32 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGB4Q8WW32 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
HMGB4Q8WW32 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 AC011369.2-201ENST00000624423 1567 ntBASIC6.02□□□□□ -1.45
HMGB4Q8WW32 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 RNA5SP500-201ENST00000364486 119 ntBASIC6.02□□□□□ -1.45
HMGB4Q8WW32 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 AC016739.1-201ENST00000405359 345 ntBASIC6.02□□□□□ -1.45
HMGB4Q8WW32 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGB4Q8WW32 MYO5BP2-201ENST00000449815 1277 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms