Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.33
SNED1Q8TER0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SNED1Q8TER0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 RNU1-146P-201ENST00000364015 165 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 RNU1-59P-201ENST00000364829 162 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 AL121977.1-201ENST00000401636 979 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC104837.2-201ENST00000427236 424 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 RPS3AP53-201ENST00000454716 778 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 HMGB1P44-201ENST00000508597 572 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC024940.3-201ENST00000538551 316 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 DHFRP1-201ENST00000579682 559 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 MIR378J-201ENST00000611988 109 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 U1.25-201ENST00000614085 162 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 U1.34-201ENST00000618578 162 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 U1.31-201ENST00000620022 160 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 PANDAR-201ENST00000629595 1506 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 CASC19-281ENST00000642118 1554 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 AC005225.5-201ENST00000623547 2225 ntBASIC6.71□□□□□ -1.34
SNED1Q8TER0 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.71□□□□□ -1.34
SNED1Q8TER0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNED1Q8TER0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 RNA5SP487-201ENST00000410186 122 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC093655.2-201ENST00000425735 631 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 RPS11P7-201ENST00000442125 465 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 OSTCP1-201ENST00000455507 450 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC092324.1-201ENST00000468671 324 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 OR51A1P-201ENST00000511110 946 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 BRD9P1-201ENST00000529855 560 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC103968.1-201ENST00000557841 573 ntBASIC6.7□□□□□ -1.34
SNED1Q8TER0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNED1Q8TER0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.7□□□□□ -1.34
SNED1Q8TER0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC092017.2-201ENST00000427600 362 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AL672138.1-201ENST00000450604 1015 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 RN7SKP99-201ENST00000517028 307 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 AP004607.2-201ENST00000533949 322 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC092490.3-201ENST00000545370 572 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms