Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL22A1Q8NFW1 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL22A1Q8NFW1 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL22A1Q8NFW1 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL22A1Q8NFW1 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL22A1Q8NFW1 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AP004607.3-201ENST00000530354 3915 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AL078621.3-201ENST00000623707 2042 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AC092747.4-201ENST00000620519 1861 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 RPL18P10-201ENST00000425606 538 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 MEMO1P4-201ENST00000453590 386 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 RN7SL817P-201ENST00000480777 288 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 RPS4XP20-201ENST00000505751 772 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 IGKV1-32-201ENST00000519290 311 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AP005403.1-201ENST00000579720 229 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 RN7SL690P-201ENST00000582087 240 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 AC068769.1-201ENST00000474767 2426 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 SDAD1P1-202ENST00000524156 2051 ntBASIC7.25□□□□□ -1.25
COL22A1Q8NFW1 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 CASC19-243ENST00000641588 1546 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 FAM3C2-201ENST00000312214 681 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 RNA5SP455-201ENST00000365190 119 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC012519.1-201ENST00000424588 610 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 DNAJC19P7-201ENST00000428811 344 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 TMEM183AP1-205ENST00000432739 290 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 KNOP1P3-201ENST00000446933 426 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 RPL7AP28-201ENST00000464513 571 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 RPS17P5-201ENST00000498293 408 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AP006289.1-201ENST00000538089 277 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC092724.1-201ENST00000624623 3397 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AC063976.2-201ENST00000425667 3556 ntBASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL22A1Q8NFW1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 RNA5SP479-201ENST00000364858 117 ntBASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 RPL5P25-201ENST00000441148 775 ntBASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AC007537.2-201ENST00000472093 511 ntBASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 RN7SL356P-201ENST00000582228 248 ntBASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AC006115.2-201ENST00000596823 202 ntBASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.23□□□□□ -1.25
COL22A1Q8NFW1 AC006206.1-201ENST00000544842 3387 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms