Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC090607.5-201ENST00000615692 224 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 AC245100.2-201ENST00000454544 1679 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK2Q86Y07 AC026523.2-201ENST00000625039 7739 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 AP000473.2-201ENST00000602659 1537 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
VRK2Q86Y07 AC092451.3-201ENST00000625067 1343 ntBASIC5.23□□□□□ -1.57
VRK2Q86Y07 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC107977.1-201ENST00000355745 939 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 SUGT1P2-201ENST00000379452 992 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AL158827.1-201ENST00000416300 391 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 MTND2P40-201ENST00000436718 841 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 RFPL4AP3-201ENST00000515267 345 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 IGLV3-24-201ENST00000517477 197 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC073593.1-201ENST00000624500 411 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC009950.2-201ENST00000636548 183 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK2Q86Y07 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
VRK2Q86Y07 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK2Q86Y07 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRK2Q86Y07 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
VRK2Q86Y07 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
VRK2Q86Y07 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRK2Q86Y07 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.21□□□□□ -1.57
VRK2Q86Y07 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AL360270.2-201ENST00000562952 5985 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK2Q86Y07 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AK4P4-201ENST00000419465 646 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 VTI1BP4-201ENST00000427516 527 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VRK2Q86Y07 ACA64.1-201ENST00000459171 127 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 SNORD125-201ENST00000459538 96 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 RN7SL197P-201ENST00000466981 299 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 RPS17P15-201ENST00000475609 349 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 DUTP7-201ENST00000507982 486 ntBASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK2Q86Y07 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms