Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 VTI1BP4-201ENST00000427516 527 ntBASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC093719.1-201ENST00000480427 441 ntBASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 RPL32P33-201ENST00000487023 394 ntBASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC073610.1-201ENST00000489971 396 ntBASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 NRBF2P4-201ENST00000520874 850 ntBASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3CQ6NXT2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 SNORD1C-201ENST00000363315 78 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RNA5SP131-201ENST00000365452 119 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC005522.1-201ENST00000395416 346 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 OR3A2-201ENST00000408891 1076 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 NIFKP3-201ENST00000417799 865 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 MTND6P5-201ENST00000448266 512 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC109481.1-201ENST00000509173 282 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 ATP5LP3-201ENST00000514223 304 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AL049872.1-201ENST00000556323 322 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC007225.2-201ENST00000562529 256 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 MIR1273E-201ENST00000581165 102 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 LINC02019-201ENST00000608605 2060 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 PROS2P-201ENST00000474651 1951 ntBASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3CQ6NXT2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 YES1P1-201ENST00000418510 1628 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC005224.3-201ENST00000584683 2140 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 CASC19-255ENST00000641733 1385 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms