Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 RN7SKP48-201ENST00000365031 328 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AL445529.1-201ENST00000398713 389 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 EI24P3-201ENST00000399046 1062 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 AL121977.1-201ENST00000401636 979 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 RN7SKP127-201ENST00000410443 354 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AL451074.5-201ENST00000415894 435 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 EFCAB14P1-201ENST00000442409 463 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 RPL12P25-201ENST00000455592 494 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC100843.1-201ENST00000475372 550 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC091839.1-201ENST00000513087 269 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 RNU6-976P-201ENST00000516086 111 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 RNU6-182P-201ENST00000516970 105 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 RPL10P19-201ENST00000519013 301 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 IGHVIII-82-201ENST00000522058 250 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 TRIM51EP-201ENST00000524374 1516 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC007614.2-201ENST00000569877 1851 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 MIR6731-201ENST00000614863 72 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 CASC19-221ENST00000641309 1382 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 OR9M1P-202ENST00000641564 3163 ntBASIC8.67□□□□□ -1.02
VARS2Q5ST30 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 LINC00663-203ENST00000586885 2546 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC011453.1-201ENST00000597619 2239 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC025574.1-201ENST00000554784 1653 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 RNU6-662P-201ENST00000384253 104 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC068050.1-201ENST00000394891 380 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 HSPE1P1-201ENST00000421494 318 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ATP5JP1-201ENST00000431631 322 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 CYP4F25P-201ENST00000446871 520 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 RPS20P4-201ENST00000461659 355 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 RPL5P30-201ENST00000465511 891 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms