Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC015983.1-201ENST00000441577 373 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 RPL5P10-201ENST00000445207 894 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC118758.1-202ENST00000454719 225 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AL356390.1-201ENST00000455684 397 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC068228.1-201ENST00000461723 211 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC023194.2-201ENST00000465398 406 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 RN7SL269P-201ENST00000467795 305 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC018797.1-201ENST00000510791 255 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 RN7SKP238-201ENST00000516483 249 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC022784.5-201ENST00000522241 437 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC084824.2-201ENST00000548906 345 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC007956.1-201ENST00000555623 542 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AL845552.1-201ENST00000556820 323 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AP005119.1-201ENST00000580956 292 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC124916.2-201ENST00000604416 224 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 NANOGP3-201ENST00000605855 286 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC067838.1-201ENST00000606064 577 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC111152.1-202ENST00000635848 339 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 FBXL21-201ENST00000297158 1305 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 AC117409.1-201ENST00000470499 1310 ntBASIC3.83□□□□□ -1.8
SYCNQ0VAF6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCNQ0VAF6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL353796.1-201ENST00000561542 3241 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AF287957.1-201ENST00000607368 1595 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC104966.1-201ENST00000467010 1464 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL354854.1-201ENST00000455940 1363 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 COX6B1P3-201ENST00000312310 260 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RNU6-697P-201ENST00000363348 107 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 MIR130B-202ENST00000385018 82 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL445213.1-201ENST00000412589 747 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RPL35AP3-201ENST00000414680 288 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RNGTTP1-201ENST00000420965 728 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RCC2P2-201ENST00000422174 918 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL354766.1-201ENST00000423396 542 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AL157385.1-201ENST00000446973 268 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 HMGN1P8-201ENST00000463578 288 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 RN7SL57P-201ENST00000493687 290 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCNQ0VAF6 AC105384.2-201ENST00000508433 640 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 GLUD1P3-202ENST00000508551 200 ntBASIC3.82□□□□□ -1.8
SYCNQ0VAF6 SCARNA18.1-201ENST00000516330 83 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms