Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-889P-201ENST00000517189 103 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN1BQ07699 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR10D4P-201ENST00000525892 951 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 NPM1P35-201ENST00000533043 868 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC008055.1-201ENST00000547032 609 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AC009729.1-201ENST00000548873 1133 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN1BQ07699 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC023813.4-201ENST00000607580 580 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AL162233.1-201ENST00000620014 944 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR7A1P-202ENST00000641542 1158 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 LINC02019-201ENST00000608605 2060 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SCN1BQ07699 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SCN1BQ07699 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SCN1BQ07699 RNU4-39P-201ENST00000362455 127 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 RNU6-31P-201ENST00000384388 108 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 SNORD94-201ENST00000386037 137 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 ARSFP1-201ENST00000398758 477 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 GPS2P1-201ENST00000411761 986 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 PTCD2P2-201ENST00000415579 1095 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 RPS26P13-201ENST00000419030 330 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 NDUFA5P10-201ENST00000432147 357 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 EMC3-AS1-205ENST00000438698 534 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 PA2G4P1-201ENST00000442248 1197 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 NPM1P39-201ENST00000449818 867 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 MTND2P3-201ENST00000452458 470 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 FRG2FP-204ENST00000453982 852 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 RPL12P39-201ENST00000455456 496 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 TPRKBP1-201ENST00000456243 481 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC096741.1-201ENST00000472250 846 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AP003385.3-201ENST00000472498 287 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 CDH12P2-201ENST00000504393 298 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN1BQ07699 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AC135983.3-201ENST00000528049 1226 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC007346.2-201ENST00000564816 892 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN1BQ07699 AC068726.1-201ENST00000610993 341 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 MIR6133-201ENST00000617057 108 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 AL121890.2-201ENST00000617644 465 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 SNX18P12-201ENST00000624821 759 ntBASIC5.26□□□□□ -1.57
SCN1BQ07699 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms