Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 AF287957.1-201ENST00000607368 1595 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXG1P55316 RNA5SP477-201ENST00000362639 119 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 RNA5SP514-201ENST00000363717 111 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 RNU6-819P-201ENST00000364116 107 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 LCN1P2-201ENST00000372030 223 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 TRAV35-201ENST00000390462 330 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 NPM1P38-201ENST00000403835 865 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AP002530.1-201ENST00000405705 684 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 SNRPEP6-201ENST00000407465 277 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 RPL35AP3-201ENST00000414680 288 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 RPS17P17-201ENST00000419392 409 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC016907.1-201ENST00000419483 435 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 XKRYP1-201ENST00000423438 492 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 XKRYP2-201ENST00000432915 492 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 NDUFA5P1-201ENST00000433858 341 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 MTND4P6-201ENST00000438297 472 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 KATNBL1P3-201ENST00000443475 909 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXG1P55316 snoU109.3-201ENST00000459477 145 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 MORF4L2P1-201ENST00000503761 858 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC008945.1-201ENST00000505144 499 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC020699.1-201ENST00000505161 445 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC025458.1-201ENST00000506046 166 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 HAUS1P3-201ENST00000523909 662 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 TRIM77BP-201ENST00000524985 1119 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC068305.2-201ENST00000550567 1205 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 OOSP1P2-201ENST00000579644 351 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 AL365181.4-201ENST00000609800 547 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 AC009090.3-201ENST00000616553 565 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC009032.1-201ENST00000617574 431 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AC007275.1-201ENST00000621243 671 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXG1P55316 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXG1P55316 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 AP004289.1-201ENST00000436307 2205 ntBASIC5.31□□□□□ -1.56
FOXG1P55316 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXG1P55316 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXG1P55316 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXG1P55316 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FOXG1P55316 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXG1P55316 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.3□□□□□ -1.56
FOXG1P55316 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXG1P55316 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 OR10R3P-201ENST00000361688 942 ntBASIC5.3□□□□□ -1.56
FOXG1P55316 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXG1P55316 MIR1282-201ENST00000408865 101 ntBASIC5.3□□□□□ -1.56
FOXG1P55316 MTND4P22-201ENST00000413116 1169 ntBASIC5.3□□□□□ -1.56
FOXG1P55316 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXG1P55316 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXG1P55316 HIGD1AP15-201ENST00000416198 280 ntBASIC5.3□□□□□ -1.56
FOXG1P55316 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms