Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGCS2P54868 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGCS2P54868 DHFRP1-201ENST00000579682 559 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 AL513327.3-201ENST00000602618 469 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGCS2P54868 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGCS2P54868 AC109583.2-201ENST00000617367 129 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 MT-RNR2-201ENST00000387347 1559 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 ZNF733P-202ENST00000444809 1573 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGCS2P54868 AL591135.1-201ENST00000401578 5914 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AC131971.1-201ENST00000332881 1482 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGCS2P54868 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGCS2P54868 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 SNORD1C-201ENST00000363315 78 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AL589647.1-201ENST00000402485 466 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 DUTP5-201ENST00000406790 469 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 Y_RNA.625-201ENST00000411256 107 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 SRSF1P1-201ENST00000424058 520 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 RPS23P9-201ENST00000448848 438 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AL389915.2-201ENST00000454576 441 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 HMGB1P40-201ENST00000525121 540 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGCS2P54868 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGCS2P54868 AL390726.5-202ENST00000564800 256 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 RPL10P14-201ENST00000565265 298 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGCS2P54868 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HMGCS2P54868 AC104162.1-201ENST00000430831 2382 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 AC011933.2-201ENST00000578539 2790 ntBASIC6.41□□□□□ -1.38
HMGCS2P54868 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGCS2P54868 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HMGCS2P54868 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGCS2P54868 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGCS2P54868 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGCS2P54868 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGCS2P54868 AC023421.1-201ENST00000590535 1785 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGCS2P54868 RNU1-149P-201ENST00000390870 161 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
HMGCS2P54868 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGCS2P54868 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGCS2P54868 AC007161.1-204ENST00000423039 460 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGCS2P54868 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 RN7SL97P-201ENST00000486780 299 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGCS2P54868 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGCS2P54868 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGCS2P54868 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGCS2P54868 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGCS2P54868 OR8G3P-201ENST00000533406 921 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGCS2P54868 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGCS2P54868 OR1F2P-201ENST00000570470 933 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGCS2P54868 MIR4646-201ENST00000580775 63 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 MIR4436B2-201ENST00000581415 91 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 MIR4436B1-201ENST00000583272 91 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 AC006116.3-201ENST00000592968 361 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 TAS2R6P-201ENST00000605022 826 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGCS2P54868 CYP4F35P-202ENST00000636121 390 ntBASIC6.4□□□□□ -1.38
HMGCS2P54868 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
HMGCS2P54868 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms