Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RN7SL269P-201ENST00000467795 305 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC023245.1-201ENST00000468501 517 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMK1P53667 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LIMK1P53667 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC015802.2-201ENST00000589690 189 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC104785.1-201ENST00000603220 588 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC024589.2-201ENST00000605642 1294 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC007204.2-201ENST00000615022 616 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC008115.4-201ENST00000619780 775 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC073342.3-201ENST00000624211 193 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC007683.2-201ENST00000624681 714 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 AL592429.1-201ENST00000403909 1473 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC119674.1-213ENST00000641177 1386 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC006484.1-201ENST00000435086 1884 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 RNA5SP500-201ENST00000364486 119 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.92□□□□□ -1.46
LIMK1P53667 AL050335.1-201ENST00000396909 869 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 RPS20P25-201ENST00000412447 352 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RPL23AP27-201ENST00000415161 451 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 FABP7P2-201ENST00000429946 379 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AL138787.1-202ENST00000437804 898 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RBMY2TP-201ENST00000451162 947 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RANP2-201ENST00000456833 229 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.92□□□□□ -1.46
LIMK1P53667 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.92□□□□□ -1.46
LIMK1P53667 HMGN2P36-201ENST00000529541 409 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AP001804.2-201ENST00000533932 910 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AC006530.1-201ENST00000555980 571 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC007494.1-201ENST00000562293 760 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 AL008723.3-201ENST00000608926 449 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RPSAP73-201ENST00000614820 330 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AC096861.1-201ENST00000616652 240 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RN7SL544P-201ENST00000617232 284 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC068870.2-201ENST00000620635 389 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 RN7SL763P-201ENST00000620922 284 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 CASC19-264ENST00000641912 1184 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 AC009779.8-201ENST00000641684 4384 ntBASIC5.92□□□□□ -1.46
LIMK1P53667 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.92□□□□□ -1.46
LIMK1P53667 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMK1P53667 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.92□□□□□ -1.46
LIMK1P53667 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMK1P53667 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
LIMK1P53667 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms