Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.29□□□□□ -1.4
COPAP53621 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COPAP53621 RNU6-609P-201ENST00000365459 107 ntBASIC6.29□□□□□ -1.4
COPAP53621 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 SUGT1P2-201ENST00000379452 992 ntBASIC6.29□□□□□ -1.4
COPAP53621 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COPAP53621 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.29□□□□□ -1.4
COPAP53621 SLC20A1P1-201ENST00000413906 956 ntBASIC6.29□□□□□ -1.4
COPAP53621 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 GLUD1P9-201ENST00000420997 1173 ntBASIC6.29□□□□□ -1.4
COPAP53621 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 RPS3P2-201ENST00000421346 701 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC021876.1-201ENST00000425959 359 ntBASIC6.29□□□□□ -1.4
COPAP53621 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 AL606490.7-201ENST00000433136 191 ntBASIC6.29□□□□□ -1.4
COPAP53621 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 AC079922.1-201ENST00000443291 359 ntBASIC6.29□□□□□ -1.4
COPAP53621 OR13K1P-201ENST00000444577 975 ntBASIC6.29□□□□□ -1.4
COPAP53621 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 CST12P-201ENST00000457644 362 ntBASIC6.29□□□□□ -1.4
COPAP53621 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AL355032.1-201ENST00000472981 438 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC098583.1-201ENST00000480875 255 ntBASIC6.29□□□□□ -1.4
COPAP53621 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 MTCO1P31-201ENST00000506355 492 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.29□□□□□ -1.4
COPAP53621 AC090958.1-201ENST00000511122 351 ntBASIC6.29□□□□□ -1.4
COPAP53621 OR5H7P-201ENST00000514084 930 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC016550.3-201ENST00000515706 767 ntBASIC6.29□□□□□ -1.4
COPAP53621 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 MTND1P6-201ENST00000523621 946 ntBASIC6.29□□□□□ -1.4
COPAP53621 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 MTND5P21-201ENST00000531961 522 ntBASIC6.29□□□□□ -1.4
COPAP53621 OSBPL9P3-201ENST00000534523 595 ntBASIC6.29□□□□□ -1.4
COPAP53621 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 AL121839.1-201ENST00000556233 1185 ntBASIC6.29□□□□□ -1.4
COPAP53621 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COPAP53621 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 AC027216.1-201ENST00000577726 685 ntBASIC6.29□□□□□ -1.4
COPAP53621 MIR3614-201ENST00000581261 86 ntBASIC6.29□□□□□ -1.4
COPAP53621 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.29□□□□□ -1.4
COPAP53621 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 AC027243.2-201ENST00000602530 724 ntBASIC6.29□□□□□ -1.4
COPAP53621 AL096803.3-201ENST00000609032 532 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AL391834.2-201ENST00000609982 546 ntBASIC6.29□□□□□ -1.4
COPAP53621 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.29□□□□□ -1.4
COPAP53621 AL133370.2-201ENST00000619934 439 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC026124.2-201ENST00000621847 656 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC129778.1-202ENST00000623812 261 ntBASIC6.29□□□□□ -1.4
COPAP53621 AC010872.1-201ENST00000624225 675 ntBASIC6.29□□□□□ -1.4
COPAP53621 AL591379.1-207ENST00000635982 261 ntBASIC6.29□□□□□ -1.4
COPAP53621 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.29□□□□□ -1.4
COPAP53621 DNM1P47-203ENST00000571780 12667 ntBASIC6.29□□□□□ -1.4
COPAP53621 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.29□□□□□ -1.4
COPAP53621 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 HSPD1P7-201ENST00000447985 1686 ntBASIC6.29□□□□□ -1.4
COPAP53621 MTCO1P15-201ENST00000529569 1526 ntBASIC6.29□□□□□ -1.4
COPAP53621 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPAP53621 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
COPAP53621 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 AC008627.1-201ENST00000517511 1704 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC093297.3-201ENST00000607056 2517 ntBASIC6.28□□□□□ -1.4
COPAP53621 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 RN7SKP78-201ENST00000364711 318 ntBASIC6.28□□□□□ -1.4
COPAP53621 RNU6-650P-201ENST00000365658 111 ntBASIC6.28□□□□□ -1.4
COPAP53621 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COPAP53621 MIR137-201ENST00000385223 102 ntBASIC6.28□□□□□ -1.4
COPAP53621 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.28□□□□□ -1.4
COPAP53621 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms